| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1366 |
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| Symbol | |
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| ID | 3906568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1641531 |
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| End bp | 1642463 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878703 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_480472 |
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| Protein GI | 86740072 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.4191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGG GCCAGACTGC CCCCGCCGCC GGCCCGGCGA CCGACTCCGC CCGGCATGCC
GGTACCGCCC GCGTCAAGCG CGGCATGGCG GAGATGCTCA AGGGCGGTGT GATCATGGAT
GTGGTCACCG CCGAGCAGGC CCGCATCGCC GAGGACGCCG GCGCCGTCGC GGTGATGGCG
CTGGAGCGGG TTCCCGCCGA CATCCGGGCG CAGGGTGGGG TGGCGCGGAT GAGTGATCCC
GACATGATCT CGGAGATCAT CGAGGCGGTC TCCATCCCGG TCATGGCCAA GGCCCGGATC
GGGCATTTCG TCGAGGCACA GGTGCTGCAG GCGCTCGGGG TGGACTACGT CGACGAGTCC
GAGGTTCTCA CGCCTGCCGA CCCGCACCAC CACATCGACA AGTGGCGCTT CACGGTGCCG
TTCGTCTGCG GAGCCACCAA CCTGGGGGAG GCGCTGCGCC GGATCGCCGA GGGCGCGGCG
ATGATCCGTT CCAAGGGTGA GGCGGGCACC GGCGAGGTGT CCAACGCCGT GGTGCACATG
CGTACCATCC GGGCGGAGAT CGCCCGGCTG TCGGGGCTGC CCGCCGAGGA GCTCTACGCG
GCGGCCAAGG AGCTGCGCGC CCCGGTCGAG CTGGTCGCCG AGGTGGCCCG GCTCGGTCGG
CTGCCCGTCG TGCTGTTCAC CGCCGGCGGT ATCGCCACCC CGGCGGACGC GGCGCTGATG
ATGCAGCTCG GCGCGGACGG GGTGTTCGTC GGGTCCGGGA TCTTCAAGTC CGGGGACCCG
GCGCGCCGCG CTCGGGCCAT CGTCGAGGCG ACCACCATGT TCAAGGACCC CGACGTTCTG
GTGAAGGTCT CCCGGGGCCT TGGCGAGGCG ATGGTAGGCA TCAACGTCAC CGAGCTTCCC
CCGGAAGCCC GCTACGCCGA CCGCGGCTGG TGA
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| Protein sequence | MSEGQTAPAA GPATDSARHA GTARVKRGMA EMLKGGVIMD VVTAEQARIA EDAGAVAVMA
LERVPADIRA QGGVARMSDP DMISEIIEAV SIPVMAKARI GHFVEAQVLQ ALGVDYVDES
EVLTPADPHH HIDKWRFTVP FVCGATNLGE ALRRIAEGAA MIRSKGEAGT GEVSNAVVHM
RTIRAEIARL SGLPAEELYA AAKELRAPVE LVAEVARLGR LPVVLFTAGG IATPADAALM
MQLGADGVFV GSGIFKSGDP ARRARAIVEA TTMFKDPDVL VKVSRGLGEA MVGINVTELP
PEARYADRGW
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