Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1357 |
Symbol | |
ID | 3904601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1629706 |
End bp | 1630566 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637878690 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_480463 |
Protein GI | 86740063 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.414025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCAC GGATCAGACC ATCGATCCTG CTTCGGATTG TCGGTGCGGC CGCCGTGGCC CTGGTCGCCG TGGCCCTGGT CGCCGGGGTG GCTCTGCATC TCGTGGTGGG CGGGTCCGCC GGGGCGGGCG CACCCGGCCC CCGGCCCGGC GTGGACGGGA CCTCACCAAC CGCCCTGTCC GGCCGGAAGG TCGTTCTCGA TCCCGGGCAC AACGGAGGAA ACGGCGCCGC CGCGGGGTCG ATCAACCGGC GGGTTCCGGC CGGCGGTTTC GACAAGGAAT GCGACACCGT CGGCGCCGAG ACCGACAGTG GTTACCCGGA GCACGCCTTC ACCTTCGACG TCGCTGGGCG GGCGGCGGCC ATTCTGCGCT CCCGGGGCGC GAGCGTGATC CTGACGCGCG ACAACGACTC CGGGGTGGGC CCGTGCATCG ACGAGCGGGC CCGCATCGGC AACCGGACCT CGGCCGACGC GGTGGTGTCG ATACATGCCG ACGGGGGACC GGCGGACGGG CGCGGCTTTC ATGTCATCGC GCCCGCGCTC AGCCCGGACC GGGCCAACGC ACCGATCCTC GCCCCGTCGG CACGTCTTGC GGCGATGGTG CGATCCGCCT TCGGCCGGGC CACCGGGCAG CCACTGGCGG ACTACCTGGG CGAGGATGGT ATGACGATCC GCTCCGATCT CGGTGGGCTC AACCTCTCGC GGGTGCCGAA GGTCTTCCTG GAGTGCGGCA ACATGCGCAA CCGCACCGAT GCGGCCGAGC TCGCCGACCC GGCCTGGCGG GCCCGGGCGG CGGCGGGCCT TGTGGACGGG ATCACGTCGT TCCTGCTGGG GGACGAGGCG TCCTCGCCCG GCCCGGGCTG A
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Protein sequence | MPARIRPSIL LRIVGAAAVA LVAVALVAGV ALHLVVGGSA GAGAPGPRPG VDGTSPTALS GRKVVLDPGH NGGNGAAAGS INRRVPAGGF DKECDTVGAE TDSGYPEHAF TFDVAGRAAA ILRSRGASVI LTRDNDSGVG PCIDERARIG NRTSADAVVS IHADGGPADG RGFHVIAPAL SPDRANAPIL APSARLAAMV RSAFGRATGQ PLADYLGEDG MTIRSDLGGL NLSRVPKVFL ECGNMRNRTD AAELADPAWR ARAAAGLVDG ITSFLLGDEA SSPGPG
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