Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1335 |
Symbol | |
ID | 3906548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1602461 |
End bp | 1603876 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637878668 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_480441 |
Protein GI | 86740041 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.073104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGTTG TGATCGTCGG TGGGGGTATC GCCGGGCTCT CGGCCGCCCG CGCCTTGGCC GGGCACGCCG AAGTGACCGT CCTCGATGCG GCGGACCGGG TCGGTGGCAA GCTGCGTACC ACCCCGATCG AGGGTCTGGA CGTCGAAGAG GGCGCGGAGT CCTTCCTCGC CCGGGTTCCC GACGGACTCC GCCTGGCCCG GCAGATCGGG CTCGGGCACG AGATCGTGCA TCCGGCCACG ACGTCAGCCT CACTGTGGAT CCGCGGCCGG CTGCATCCCA TCCCCCCGAA CACCCTGCTC GGAGTGCCGA CCGACGTCCT CGGCCTGCTC CGCTCGCGGG TGCTGTCCCC GTGGGGGCTG GTGCGGGCCG CCGCCGACCT GGTGCTGCCG CGGACGCGTT TCGCCGACGA TCCGACCGTC GGTCGCTACG TCGGCACGCG GGTCGGGCGC GAAGTCGTCG ACCTGCTGGT GGATCCGCTG CTCGGGGGGG TGTATGCGGG CCGGGCCGAC GCGCTGTCGC TGCGGGCGAC CGTGCCCCAG CTCGTCCCCA TCTTCGCCGA GGACCGCTCG CTGCTCCTCG GCGCGCACCG GGTGCGGGCC CGTACCGGAC CCGCGACGAC GACCTCGACG GCGCCGCTGT TCGCCACGCT TCGGGGGGGG CTGGGCTCCT TCGCGGCGCG AGTGGCGGCG CAGTCCGGCG CCACCGTGCG CACCGGGGTG CTCGTCCGCT CGATCGCGAA GACCGCGGGC GGCTGGCAGG TCAACTGTGA CCGGGTGGGC GGCGCGGACG CCCTCGGGCC GTTCCAGGCC GACGCCGTGA TCCTCGCGGT GCCTGCCGGG GTGGCCCGCG CCCTGCTGGC GCCGCTGGCC CCGCATGCCT CCGCCCCGCT TGCCGGCGTG CCCTACGCCT CGGTCGGCCT GGTGACGCTG GTCTACCGGG ACGCCGCGCC GCCACCCGGC AGCGGATTCC TCGTGCCCGC CCGGGCGGGC ACCGCGGTGA AGGCGGCCAC CTTCCTGTCC GCCAAGTGGC CGCACCTGGG CTCCGACCGG CTCACGGTGG TGCGGGCGAG CATCGGCCGC GCCGGTGCCG AACAGGACCT GCAGCGCGGG GATGTGGAGC TCGCCGGGGT GGCGGCGGCG GAGATCGCGC AGATCACCGG CCTGTCCGGT CGGCCGGTAG CGACCCGGGT GAGTCGCTGG GGCGGGGCGC TCCCGCAGTA CCTGCCGGGT CATCTCAACC GGATCGCCGC GGTGCGCCGG GGGCTTCCAG CGGGGATCGC CCTCGCCGGC GCGGGATACG ACGGTGTAGG CATCCCGGCC TGCATCCGGT CGGGGGAGAC CGCCGCGCAC GCGGTGCTGA GGGCTACCCG GACGGCGCAG GGCAGTCCGG CCGATCCGGT GGGCCCGGGA ATCTGA
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Protein sequence | MRVVIVGGGI AGLSAARALA GHAEVTVLDA ADRVGGKLRT TPIEGLDVEE GAESFLARVP DGLRLARQIG LGHEIVHPAT TSASLWIRGR LHPIPPNTLL GVPTDVLGLL RSRVLSPWGL VRAAADLVLP RTRFADDPTV GRYVGTRVGR EVVDLLVDPL LGGVYAGRAD ALSLRATVPQ LVPIFAEDRS LLLGAHRVRA RTGPATTTST APLFATLRGG LGSFAARVAA QSGATVRTGV LVRSIAKTAG GWQVNCDRVG GADALGPFQA DAVILAVPAG VARALLAPLA PHASAPLAGV PYASVGLVTL VYRDAAPPPG SGFLVPARAG TAVKAATFLS AKWPHLGSDR LTVVRASIGR AGAEQDLQRG DVELAGVAAA EIAQITGLSG RPVATRVSRW GGALPQYLPG HLNRIAAVRR GLPAGIALAG AGYDGVGIPA CIRSGETAAH AVLRATRTAQ GSPADPVGPG I
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