Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1322 |
Symbol | |
ID | 3906594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1584661 |
End bp | 1585356 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878655 |
Product | TrkA-like |
Protein accession | YP_480428 |
Protein GI | 86740028 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.465813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC GCCGGGTGGT GATCGCGGGG GCGGGCAAGG TCGGCCGGTC CATCGCCGCC GAACTGCTGG AGAACGGCTC CGAGGTGCTC ATCATCGAGC GGGATCCGCA GAAGATCCGG ACCGACGCGC TACCGGAGGC CCGGTGGCTG CTCGCGGACG CCTGCGAGCT GTCCCAACTC GACGCGGCCG GGCTGAATGA GTACACCGTC CTGGTGGCCG CCACCGGGGA CGACAAGGTG AACCTCGTCG TCTCGTTGCT CGCGAAGACC GAGTTCGGCG TGCCCCGGGT AGTGGCGCGG GTCAACCATC CCAAGAACGA GTGGCTGTTC ACCGAGTCGT GGGGGGTGGA CGTGGCGGTG TCCGCGCCGC GCCTAATCAC GGCTCTGGTC GAGGAGGCCG TCAGCGTCGG CGACCTCGTC CAGCTGATGC GGTTCCGGCA GAGCGATGCA TCCCTCGTCG AGCTGACGCT GGCCGAGAAC GCGCCGGTGA TCGGCCAGCG GCTCAGCGAG ATCACCCTGC CGGCGGACAG CGCCTTGGTG GTGATCCTGC GTGACGGACG GGCGGTCGTT CCCTCGCCCG ACGCCACGTT GGAAGACGGC GACGAGATTC TCGCGGTCAC GACAAATGCC GAGGCCGAGG AGAAGCTCGC TGTGCTGCTC GGTCAGGCGC CGGCAGGCGC GGGCGCGCCG GGCTGA
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Protein sequence | MSVRRVVIAG AGKVGRSIAA ELLENGSEVL IIERDPQKIR TDALPEARWL LADACELSQL DAAGLNEYTV LVAATGDDKV NLVVSLLAKT EFGVPRVVAR VNHPKNEWLF TESWGVDVAV SAPRLITALV EEAVSVGDLV QLMRFRQSDA SLVELTLAEN APVIGQRLSE ITLPADSALV VILRDGRAVV PSPDATLEDG DEILAVTTNA EAEEKLAVLL GQAPAGAGAP G
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