Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1269 |
Symbol | |
ID | 3906115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1515171 |
End bp | 1516535 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637878603 |
Product | CBS |
Protein accession | YP_480376 |
Protein GI | 86739976 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.183003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCG GTGATCTTTT TCTCGTCTTC ATCGCCGTGA TGGGCTCGCT TGCCGCGGCG GGTCTCGGCG GCATCGACGC GGCCCTGACC CGGGTCTCCC GGGTGACGGT CGAGGGTTTC TCCCGCCAGG GCCGGGCCGG CGCCCGGAAC CTGGCGACCG TCGTGGCCGA TCCGGGCCGC TACCTCGCGC TGCTGCTGCT CCTGCGCATC GTCGCGGAGA TGCTCGCCGC GGCCTGTATC ACGGTGCTGT TCGTGCACGC CTACGGGGCC GGGTTCGCCG CGATCGGCCT CGGGACGCTG GCCTCGACCC TGGTCGCGTA CATCCTCGTC GGGGTGATGT TCCGCACCCT GGGCCGCCAG CACGCCCCTG CGGTGGCGTT GGCCAGCGCC GGTCTCACGG TCCGGCTGGC GCGGATCTTC GGGCCGTTGC CCCGGCTGCT GATCGCGTTC GGCAACGCGG TCACCCCCGG TCCTGGTTTC CGGGATGGTC CCTTCGCATC CGAGGCCGAG CTGCGCGATC TCGTCGACCT CGCCGAGGAG AACGAGGTCA TCGAGCGTGA GGAACGCGAC ATGATCGCGT CGGTGTTCGA GCTCGGGGAC ACCCTGGTGC GCGAGGTGAT GGTGCCGCGT CCGGACATGG TCTTCATCGA GTCGACGAAG ACCGTCCGGC AGGCTCTCGC GCTGGCCCTG CGCAGCGGCT TCTCGCGGAT CCCCGTCATC GGGGAGAGCG TCGACGACGT GGTGGGGATC GCCTTCCTCA AGGACATGGT CCGCCGGGAA CGGGAGGGGG GCGAGGATGG TGCGATCGCC GAGATCATGC GTTCACCCGC ACTCGTGCCC GAGAGCAAGC CCGCGGACGA CCTGCTCCGT GAGATGCAGG CGTCGCGTAC CCACATGGCG ATCGTCATCG ACGAGTACGG TGGAACCGCC GGACTCGTCA CCATCGAGGA CATCCTTGAG GAGATCGTCG GTGAGATCAC CGACGAGTAC GACAACGAGG TTCCGCCGGT GGAGTGGATC GACGCCAACA CCGCGCGGGT GACCGCCCGG CTCGACGTCG ACGATCTGGC GAAGCTGTTT GACTTCGACG TGGACGACCT GCCCGGTGCG GATGACAGCC TCACCGTCGG TGGCCTGCTG GCCACGGCCC TGGGACGGGT GCCCATCCCG GGTGCGACGG TCACGGTCGG TGGGTTGCGG CTGTCGGCGG AACGGGCCGC CGGCCGGCGT AACCAGATTG GCACCGTGGT CGTCCAGCGG TTGCCGCATC CGTCGAACGG CGACGACGGC TCGCCGCCTC CCCGATCCGA CGACGGCGGC GAACCCGTGC GCAGCTCGTC GTCGGACAGA AAGGTGAATT CGTGA
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Protein sequence | MSSGDLFLVF IAVMGSLAAA GLGGIDAALT RVSRVTVEGF SRQGRAGARN LATVVADPGR YLALLLLLRI VAEMLAAACI TVLFVHAYGA GFAAIGLGTL ASTLVAYILV GVMFRTLGRQ HAPAVALASA GLTVRLARIF GPLPRLLIAF GNAVTPGPGF RDGPFASEAE LRDLVDLAEE NEVIEREERD MIASVFELGD TLVREVMVPR PDMVFIESTK TVRQALALAL RSGFSRIPVI GESVDDVVGI AFLKDMVRRE REGGEDGAIA EIMRSPALVP ESKPADDLLR EMQASRTHMA IVIDEYGGTA GLVTIEDILE EIVGEITDEY DNEVPPVEWI DANTARVTAR LDVDDLAKLF DFDVDDLPGA DDSLTVGGLL ATALGRVPIP GATVTVGGLR LSAERAAGRR NQIGTVVVQR LPHPSNGDDG SPPPRSDDGG EPVRSSSSDR KVNS
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