| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1264 |
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| Symbol | hrcA |
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| ID | 3906110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1510354 |
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| End bp | 1511373 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637878598 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_480371 |
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| Protein GI | 86739971 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00809958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCTGGAGG ATCGGCGGCT CGAAGTCCTT CGGGCGATTG TTGAGGACTT TGTGCTGAGC
AACGAGCCGG TGGGTTCCAA GGCGCTGGCG GAGCGGCATA ATCTCGGTGT ATCGCCAGCT
ACTGTCCGTA ATGACATGTC CGCCCTGGAG GAAGAGGGGT ATATCACACA GCCTCATACC
AGCGCAGGAC GGATACCGAC GGACAAGGGC TACCGGTTGT TCGTGGACCG GTTGTCGGGG
GTGAAGCCGC TGTCCCGGGC CGAACGTCGG GCGATCCAGA GCTTCCTGGA GGGCGCCGTC
GACCTGGACG ACGTGGTGCG CCGCTCCGTG CGGCTACTCG CCCAGCTCAC CCGGCAGGTG
GCCGTCGTGC AGTACCCCTC CTTGTCGAGC AGCAGCATCC GGCACATCGA GGTTGTCACG
CTCGGCCCGT ACCGCCTGCT GATGGTCCTC ATCACCGACA CCGGCCGGGT CGAGCAGCGT
ATCGTCGACA GCCTCGTACC CGTTGACGAC GAGGTCGCCG GCGAGCTGCG TTCCGTGCTC
AACTGCGCGC TGGCCGGCCG GCGCTTGGTC GACGCCCCCG ACATCGTCGC GGCCCTGCCC
GACAGCACCC GCTCCGAGCT GCGCCCCTAC CTGACCACGG TGGCCGGTGC CGTGCTGGAG
TCGCTGGTCG AGCGGCAGGA GGAGCGCATC GCGATGGCTG GGACGGCGAA TCTCACGCGG
TCCCCGGTCG ACTTCGCCGA CTCGTTGCGG TCGATACTTG AGGCGTTAGA AGAACAGGTC
GTGCTGATGA AACTCATCGG CTCGGCGCGG GAGACCGGTA CTGTAACGGT ACGGATCGGT
CGCGAAACGG ATGTGGACGC CCTCCGGTCC ACCGCGGTGG TGGCCACGGG ATACGGTCGT
GGTCCCTTCG CGCTGGGTGG GATGGGGGTG CTCGGCCCGA TGCGCATGGA CTATCCGGGG
ACGATGGCGG CCGTCCGGGC CGTCGCCAAA TACGTGGGTG AACTCTTGGG TGCCGACTGA
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| Protein sequence | MLEDRRLEVL RAIVEDFVLS NEPVGSKALA ERHNLGVSPA TVRNDMSALE EEGYITQPHT
SAGRIPTDKG YRLFVDRLSG VKPLSRAERR AIQSFLEGAV DLDDVVRRSV RLLAQLTRQV
AVVQYPSLSS SSIRHIEVVT LGPYRLLMVL ITDTGRVEQR IVDSLVPVDD EVAGELRSVL
NCALAGRRLV DAPDIVAALP DSTRSELRPY LTTVAGAVLE SLVERQEERI AMAGTANLTR
SPVDFADSLR SILEALEEQV VLMKLIGSAR ETGTVTVRIG RETDVDALRS TAVVATGYGR
GPFALGGMGV LGPMRMDYPG TMAAVRAVAK YVGELLGAD
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