| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1257 |
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| Symbol | |
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| ID | 3906103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1500564 |
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| End bp | 1501832 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878591 |
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| Product | helix-hairpin-helix DNA-binding, class 1 |
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| Protein accession | YP_480364 |
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| Protein GI | 86739964 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0994426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAT CCACCCCTGG TCCCGGGTAC CCGCTGTCGG CCCCGTCGCC GCGTTTCCCC
GTCCACGCAT TTCCGCCTGA AACGTCCGTT TCGTCGCGAT GGCCATCGCT GGACCTGCTG
CCGTCGGACG ACGCCACCGT GCCGCTGCGT CCGCCGGACC CCCCAGCGGA CGGCTCAGCT
GGTGGATCCC GCCGCGTTCG TGACGCCACG TTCACCGAGG ACGAGCAGGA GATCGGTGGC
GACGAGTCCG ACCTGTTCGG GATTCGCGAG GGCGTGTTCC TTGATGAGGA CCGGGCCGCC
GGCGGATGGG TCGCGGACGA GCTCGCGGCG GAAGGGGCCG ATCTTGGCCG GCTGGTCGCC
GGCCGAACGG ATCGGCGCCG TCCGGTCCAC TCCCGTCTGG TCCACCCCCG TGCGGGGCGC
GAGATGGACG ATGGCGAGGA CGAGGGCGGC CGGGGACCTG ATCGCGGGCC ATCGGCCGGC
CGGCCGGCGC CGGGAGTTCC ACGGGGCGAT CTGGTCGGCG TCATCCGCAG GCGGCTTCCG
GCTACGCTGC ATGGCATCGT GGTGGCGCCG GCCGCCCGGG CCGCCCTCGT TCTCGCGTTG
GTCGCCCTCG CCGCCGCGCT CATGACCGCC TGGTTCTCCT GGCAGCACCG CCCGGTGCCG
CTCGCCTCCT CCGAGGTCGA TACCCCCCGG ACGGGGGAGT CGGCGGCGGC TGGCAACGCC
CGGTCGGACC ACTCGGACCA CGGGGCCACC TCCGCCACGG ATACGAGCGT GACTTCGGCA
CCGACGGCCA GGGCCGCCCG CACCGGGGCG AGCGGCGAGG TGGTGGTCGA CGTCGCCGGC
CGGGTGGCCC GGCCGGGGGT CGTCCGGCTC CCGGCGGGCG CGCGCGTGGT GGATGCGATC
GAACGCGCCG GGGGAGTGCT CCCGGGCACC GACACGACCG GCCTCGCCCT GGCCCGGTTG
CTGGTCGACG GAGAACAGGT CCTCGTCGAC GGCAAGCCCG GCCCGGCGCG GCCCGGAACG
GCGGCCGGGC AACCTGCGGG TACTGGCCTC GGGTCCGCCG GTTCCACCGC GGCGACCGGT
CCGATCGACC TGAATGCCGC GACCGCCGAG GAGCTTGACG GTCTGCCCGG GGTGGGGCCT
GTGCTGGCTC GCCGCATCGT CGAGTGGCGC ACGGCGCACG GGCCCTTCCG GTCGCCCGAG
CAGCTGGCGG AGGTGACCGG AGTCGGCGAC AAGCGGCTGG CCGATCTGCT GCCATTGCTG
AAGGTTTGA
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| Protein sequence | MVESTPGPGY PLSAPSPRFP VHAFPPETSV SSRWPSLDLL PSDDATVPLR PPDPPADGSA
GGSRRVRDAT FTEDEQEIGG DESDLFGIRE GVFLDEDRAA GGWVADELAA EGADLGRLVA
GRTDRRRPVH SRLVHPRAGR EMDDGEDEGG RGPDRGPSAG RPAPGVPRGD LVGVIRRRLP
ATLHGIVVAP AARAALVLAL VALAAALMTA WFSWQHRPVP LASSEVDTPR TGESAAAGNA
RSDHSDHGAT SATDTSVTSA PTARAARTGA SGEVVVDVAG RVARPGVVRL PAGARVVDAI
ERAGGVLPGT DTTGLALARL LVDGEQVLVD GKPGPARPGT AAGQPAGTGL GSAGSTAATG
PIDLNAATAE ELDGLPGVGP VLARRIVEWR TAHGPFRSPE QLAEVTGVGD KRLADLLPLL
KV
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