| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1244 |
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| Symbol | |
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| ID | 3903543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1488854 |
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| End bp | 1490533 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878578 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_480351 |
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| Protein GI | 86739951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.198291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGC AGACCCAGGC GCCCGCCGCG GCGGGCGGGG GCATGACGGG CGGTAGCGGA
GATCGGCTCG ATCCGGCGCT GATCCGTCTC GCCGGGATCG TCCTCGTCGG TGCGGTCGTG
GTGCAGCTCG ATGCGACGAT CACCTCCGTG GCGATCAACA CCCTCGCCCG ATCCTTCAAC
GTCGGAATCT CGACAATCCA GTGGGTGAGT ACCGGTTACC TGCTCGCGCT CGCCATGGTG
ATCCCGGTGA CCGGCTGGTC AGCCGAGCGG TTCGGCGCCA AGCGGATGTG GCTGCTGTCG
CTGGTCCTGT TCCTCGTCGG CTCGGCGCTG TGTGGGGCGG CATGGTCGGC CGGCAGTCTC
ATCGCCTTCC GGATCGTGCA GGGCCTCGGC GGCGGCCTGC TTCTGCCTCT GATGCAGACG
ATCATCGCGC AGGCGGCCGG GCCGGAACGG CTGGGCCGCC TGATGGCGGC GGTGGGGGTG
CCCGCGCTGG TCACTCCCGT GCTCGGGCCG GTCATCGGCG GGCTGATCGT CGACGATCTC
GACTGGCGTT GGATCTTTTT CATCAACGTG CCGGTCTGCC TGATCGGGCT GGTCCTGGCC
TGGCTGGGGA TGCCGGATGT GCGGACTCCC GGGCGGCATC GCTTCGACGC TCTCGGGTTC
GCGTTGCTGT CCCCGGGGCT GGCCGCGATC GTCTACGGCT TCTCCGTGGC CGGCCGGCAG
GGTGACTTCA CGGGTGTGCG GGTGATCGTG CCGCTGGCCC TCGGCGCGGC CCTGCTCGTT
CTGTTCACGG TGCATGCCCT GCGGACCGCC GTCGAACCGA TCATCGACCT GCGGCTGTTC
CGGTCCCGGG CCTTCGCCGG TTCATCGGGG ATGATGTTCC TGTTCGGGAT CTCGCTGTTC
GGGGCGATGT TCCTGCTGCC CCTGTACGAG CAGCAGGCCC GTGGCCGCAG CGCCGCCGCC
GCCGGCCTGC TCCTCGCCCC GCAGGGGTTG GGGATGATGA TCGCCCTGAT TGTGCTGGGC
CGGGTGGCGG ACCGGCGCAG CCCGCGGTTG TTCGTTCTGG TCGGCCTTCT GCTCAGCGCG
CTGGGATCGG TTGCGTATAC ACAGGTCGCC GCCGACACCA GCGAGGTGCT GCTCGGGGTC
TCCCTGACGG TCCGCGGCAT CGGGCTGGCC ATGGCGCTCA TCCCGGTGAT GTCCTCTGCC
TACCACGGGC TGCGCCGGGA GGAGATTCCG CGCGCCACCT CCGCGGGGCG GATCTTCCAG
CAGATCGGCG GCTCACTCGG GACGGCCATC CTCGCCGTGG TGCTGTCCCA CCAGATCACC
GGCCGACCCG CCGGGACCGG ACCCGCCGAT CCGGTGGCGC TGGCCGGCGC CTTCGGTACG
GCGTTCTGGT GGACCCTCGG GTCCACGGTC CTCGCCGCAC CGTTCGCCTT TCTGCTGCCG
GGACGGCCAG CCGGCGCGGA GCAGCCCGCC CCGTCAGGCC CGCCGGTCGA GCTCCCGCGG
CCGGCCGGGG CCGTCCCCAC CCGTCGCCGG TCGGGCGACC ACGGGGAGCT GAAGAGCCAT
GAAACTTCTC CCGGCCGCCG CGCCGCCGTC TCAGGGGCCG AGGGGAACCG CCACGATGGT
CGGGAGTACC GGGTCCCCGC TCCCCGTGGC GGCCGAGGCG GTGGCCAGTG GCGCGGATGA
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| Protein sequence | MAAQTQAPAA AGGGMTGGSG DRLDPALIRL AGIVLVGAVV VQLDATITSV AINTLARSFN
VGISTIQWVS TGYLLALAMV IPVTGWSAER FGAKRMWLLS LVLFLVGSAL CGAAWSAGSL
IAFRIVQGLG GGLLLPLMQT IIAQAAGPER LGRLMAAVGV PALVTPVLGP VIGGLIVDDL
DWRWIFFINV PVCLIGLVLA WLGMPDVRTP GRHRFDALGF ALLSPGLAAI VYGFSVAGRQ
GDFTGVRVIV PLALGAALLV LFTVHALRTA VEPIIDLRLF RSRAFAGSSG MMFLFGISLF
GAMFLLPLYE QQARGRSAAA AGLLLAPQGL GMMIALIVLG RVADRRSPRL FVLVGLLLSA
LGSVAYTQVA ADTSEVLLGV SLTVRGIGLA MALIPVMSSA YHGLRREEIP RATSAGRIFQ
QIGGSLGTAI LAVVLSHQIT GRPAGTGPAD PVALAGAFGT AFWWTLGSTV LAAPFAFLLP
GRPAGAEQPA PSGPPVELPR PAGAVPTRRR SGDHGELKSH ETSPGRRAAV SGAEGNRHDG
REYRVPAPRG GRGGGQWRG
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