Gene Francci3_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1186 
Symbol 
ID3903460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1418774 
End bp1419325 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID637878518 
Producthypothetical protein 
Protein accessionYP_480294 
Protein GI86739894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTT ACCATCTGGC CCAGGTGAAC ATCGCCCGAC TGCTCGCGCC GCCCGGCTCC 
TCCGCGCTGA CCGACTTCGT CGCCGGTCTC ACCCCCACCA ACACGCTCGG CGACCGGCAG
TCTGGTGTCG TCTGGCGCCC GCGGCCCGAG GATGGCGACA CCGCCGTGCG CACGTTCGTG
TGGGAGGGCG ACGGCGACCA TGCGATCATC GTGAACCTGA CCGTGTGGGA GTCGGTGGAG
GCACTGGCCA ACTTCGTCTT CCATAGCGGC CACGGGGCGT TCCTACACCG TCGGCGCGAG
TGGTTTCATC CCATCCAGCG GACGACCAAC GCCCTGTGGT GGGTACCCGC CGGGCATCGG
CCGGGGACGG ACGAGGCCGA GGACCGGGTT CGTCACCTGC GGGCCCACGG CCCGACCGCC
ACCGCCTTCA CGTTCCGGCT GACGTTTCCA CCGCCGGACC GGCGGATCTC CCTGGTCCCG
GGAAACGGCC CGGAGAACAC CGCCGAGCAG CCGGGCCGAG CGGCACCGAG AAACGCGGCA
GCCGGAGGCT GA
 
Protein sequence
MTGYHLAQVN IARLLAPPGS SALTDFVAGL TPTNTLGDRQ SGVVWRPRPE DGDTAVRTFV 
WEGDGDHAII VNLTVWESVE ALANFVFHSG HGAFLHRRRE WFHPIQRTTN ALWWVPAGHR
PGTDEAEDRV RHLRAHGPTA TAFTFRLTFP PPDRRISLVP GNGPENTAEQ PGRAAPRNAA
AGG