Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1160 |
Symbol | |
ID | 3903588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1380953 |
End bp | 1383541 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878492 |
Product | aminopeptidase N |
Protein accession | YP_480268 |
Protein GI | 86739868 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.640463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGTCCT GCAAGTCCGT GCCGTCCGAA AGGAACCGGG TGCCCAACAA CCTCACCCGC GACGAGGCGC GCGAGCGCGC CCGCCTGCTC AACGTTGCCT CCTATGACGT CGAACTCGAC CTGACGACCG GCCACGAGAC CTTCCGCACG TCAACCGCGG TCATCTTCAC CTGCGTCGAG CCTGGGGCGT CGACGTTCAT CGAGCTCGCC GCCGCGAAGG TCGACGAGGT CGTTCTCAAC GGAGCGCCGC TCGACCCCGC CGCGGTGTTC GACGGCGAGC GGATCCGGCT CGATAACCTC GCGGAGTCGA ACCGGCTCAC GGTGGTGGCG GACGGCGTCT ACTCCCGCAC CGGTGAGGGC CTGCACCGCT TCGTCGACCC GGTGGACGAG GCCGTTTACC TCTACACCCA GTTCGAGACG TACGACGCGC ACCGGATGTA CGCCTGCTTC GACCAGCCCG ACCTCAAGGC GACGTTCACC CTCACGGTCA CCGTCCCGGC GGACTGGAAG GCGATCTCCA ACAGCGCGGT CGCCGCGGTG GCGGAGGCCG CGATCGGGGT GCGCACCATC CGCTTCCTGA CCACCCCGGT GATGTCGACG TACATCACCG CGCTCGTCGC CGGCCCGTAC CACGAGGTCC GCGACCACCA CGACGGCATC GACCTGGGCC TCTACTGCCG CCGATCGCTG GCCGAGTTCC TCGACCCCGC CGAGCTCTTC GAGATCACCA AAGCCGGGTT CGACTTCTAC CACCGGGTGT TCGACTACCG GTACCCGTTC GGCAAGTACG ACCAGTTGTT CGTGCCCGAG TTCAACGCCG GGGCGATGGA GAACGCCGGC TGCGTGACCT TCCTGGAGGA GTATGTCTTC CGGGCGAAGG TGACCGAGGC CCGCCGCGAG CGGCGCGCCG AGACGATCCT GCACGAGATG GCGCACATGT GGTTCGGTGA CCTGGTCACC ATGCGCTGGT GGGACGACCT GTGGCTGAAC GAGTCGTTCG CCACCTACAT GTCGGTCCTC GCCCAGGTGA ACGCGACCCG CTTCACCAAC GGCTGGACGA CCTTCGCCAA CGCGGAGAAG GGCTGGGCCT ACCGCCAGGA CCAGCTCTCC TCCACGCACC CGATCGTCGC CGACGCCCCG GACATGGACG CGGTACGGAC GAACTTCGAC GGCATCACCT ACGCCAAGGG CGCCTCGGTG CTCAAGCAGC TCGTGGCCTG GGTCGGCCAA GAGGAGTTCC TCGCCGGGCT GCGGGCGTAC TTCCGCCGCT ACGAGTACGC GAACACGTCG CTGCGCGACC TGCTCGACGA GTTGGAGAAC GCCAGCGGGC GGAACCTTAC CGCCTGGTCC GCGGACTGGC TGGAGACCAC CGGCGCGAAC ACCCTGCGGC CGCGCTTCTT CACCGACTCC TCGGGCCTGT TCACCTCGTT CGACGTGGTG CAGGAGCCGG CGTCGGCGCC GCCGACCGCC TCGCGCACGC TGCGCCCGCA CCGGCTCGCG ATCGGCCTTT ACGATCGGGA CGCCACCGGC GCGCTGGTCC GGCGGGAACG GGTCGAGCTC GACGTGACGG GCAAGCTCAC CGAGGTCGCC AAGCTCGTCG GTGCCCGCCA GCCGGATCTG ATCCTGCTCA ACGACGACGA CCTCACGTAC GCGAAGGTGC GCCTCGACGA GCGGTCGCTG GCCACGCTCG TCGAGGCGAT CGGCGCCATC TCCCAGTCAC TGCCCCGGAC GCTGTGCTGG GCGGCGGCCT GGGACATGAC CCGCGACGCC GAACTCGCCG CCCGGGACTA CGTCCGGCTC GTGCTGTCCG GGGTGACCGC TGAGGACGAC ATCGGCGTGG TGCAGTCGCT GCTGGCCAAG GCGGACCTGA CGATCGACAC CTACGGCGAC CCGGCAAACC GGAAGCCCGC GCTGCGCGCG CTGACGGAAC GCGCCGAGGA GCTGGCGCGC GCCGCGGCCC CCGGCAGCGA CCTGCAGCTC GTCTACACCA CCTCCTTCGC CCAGGCCGAG GAGGCCGACC AGGTGGCGCG GATCCGGGCG CTGTTCGAGG GCACCGACGT CATCGAGGGG CTCGTGCTCG ACACCGAGCT GCGCTGGACC CTGCTGACCC AACTCGTCGC CCGGGGCGTG TACGCCGACG CCGAGATCGA CACGGAGCTC GCCCGCGACC GCACCGCCAC CGGCGAGAAG CGAGCTGCGA CCGCGCGGGC GGCACGGCCG ACCGCGGCGG CGAAGGCCGC AGCCTGGTCG GCGGTCATGG ACTCGGACAC CCTGTCGAAC CACTTGGCCG CCGCGACGAT GGGCGGTTTC TGGATCTCCG ACCAGCTCGA GCTGACCCGG CCCTACGTGG ACCGTTTCTT CGACGAGATC GCTGGGATCT GGGAGACCCG CAGCTTCGAC ATGGCCTCCA CCATCACCCA GATGCTGTTC CCGGCGTCGG TGATCGAACC GGAGACGGTG GCGAAGGTCG ACGCCTACCT GGCCGAGCAC AACCCGGTCC CGCCCCTGCG GCGGGCCCTG CTGGAAGGCC GCGACGGGCT CGTCCGGGCG CTGGCCGCAC GCAAGAAGGA CATCGAGGCG GCGGCGTAG
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Protein sequence | MQSCKSVPSE RNRVPNNLTR DEARERARLL NVASYDVELD LTTGHETFRT STAVIFTCVE PGASTFIELA AAKVDEVVLN GAPLDPAAVF DGERIRLDNL AESNRLTVVA DGVYSRTGEG LHRFVDPVDE AVYLYTQFET YDAHRMYACF DQPDLKATFT LTVTVPADWK AISNSAVAAV AEAAIGVRTI RFLTTPVMST YITALVAGPY HEVRDHHDGI DLGLYCRRSL AEFLDPAELF EITKAGFDFY HRVFDYRYPF GKYDQLFVPE FNAGAMENAG CVTFLEEYVF RAKVTEARRE RRAETILHEM AHMWFGDLVT MRWWDDLWLN ESFATYMSVL AQVNATRFTN GWTTFANAEK GWAYRQDQLS STHPIVADAP DMDAVRTNFD GITYAKGASV LKQLVAWVGQ EEFLAGLRAY FRRYEYANTS LRDLLDELEN ASGRNLTAWS ADWLETTGAN TLRPRFFTDS SGLFTSFDVV QEPASAPPTA SRTLRPHRLA IGLYDRDATG ALVRRERVEL DVTGKLTEVA KLVGARQPDL ILLNDDDLTY AKVRLDERSL ATLVEAIGAI SQSLPRTLCW AAAWDMTRDA ELAARDYVRL VLSGVTAEDD IGVVQSLLAK ADLTIDTYGD PANRKPALRA LTERAEELAR AAAPGSDLQL VYTTSFAQAE EADQVARIRA LFEGTDVIEG LVLDTELRWT LLTQLVARGV YADAEIDTEL ARDRTATGEK RAATARAARP TAAAKAAAWS AVMDSDTLSN HLAAATMGGF WISDQLELTR PYVDRFFDEI AGIWETRSFD MASTITQMLF PASVIEPETV AKVDAYLAEH NPVPPLRRAL LEGRDGLVRA LAARKKDIEA AA
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