| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1122 |
|---|
| Symbol | |
|---|
| ID | 3905464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1334278 |
|---|
| End bp | 1335111 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637878454 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_480231 |
|---|
| Protein GI | 86739831 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA CATACACCGC CGAGCTGCCG TTCGGCGATC ACACCGTTTT CCGTCTGGCG
GGTCTTCTCG TGGCGGAGCG TCAACGTCGT GGTACCCGCA AGGGCACCCG GACGCTGTCC
GCGTTGGAAC AGGCCGTGAT GGTCCTGCGC TGGTTCTGTG ACGGCACCAG GGCCAGGCGG
CTCTTCTCCG ATCATGGGGT GTCCCGGTCG GTGGGCTACC GCTACCTGCA CGAGGGAGTC
GCCGTGCTCG CCTGGCAGGC CCCGGACCTG CGTGAAGCGC TGATGCGGGC CAGGGTCGCC
GGCTACGAGC ATCTCATCGT TGACGGCACG GTCATCGAGA CCGACCGGCT ACGCATGCCC
GGCCCGACCG AAGGCGTGGA CCTGTGGTGG TCCGGCACGA TCTCCAACCA CGGTGGCAAC
ATCCAGGTGC TCTCCGCCCC GGACGACGGC TGGCCACTGT GGGTCTCCGA CGTGCGGCCC
GGCCGCGAGC ACGACTCGAC CGCCCTGAAA GCCTCCGGGG CGCTGCCGGT TCTCGCCGAG
TGGACCGCCG ACCTGCACGA GGTGCTGTTC GACCTCGGCT ACGAAGGGCT GGGCAACCCG
GCCGGGCCGC TCGCGACCGC GTACAAGAAG CCCAAGGGCG GCACCCTCAC CGACGAACAG
AAAGCGCACA ACCGGATCCA CAACGCGCTA CGCGCCGTCG GTGAACGCGC GAACGCCCTG
CTCAAAGGCA CCTTCCGACT CCTCCACAAC ATCACGATCG ACCCCTGGAA GATCGGACTT
GTCGTGAAAG CCGCCCTCGT CATCCTCCAC ACCGAGCACC GCAGAACCGC CTGA
|
|---|
| Protein sequence | MSFTYTAELP FGDHTVFRLA GLLVAERQRR GTRKGTRTLS ALEQAVMVLR WFCDGTRARR
LFSDHGVSRS VGYRYLHEGV AVLAWQAPDL REALMRARVA GYEHLIVDGT VIETDRLRMP
GPTEGVDLWW SGTISNHGGN IQVLSAPDDG WPLWVSDVRP GREHDSTALK ASGALPVLAE
WTADLHEVLF DLGYEGLGNP AGPLATAYKK PKGGTLTDEQ KAHNRIHNAL RAVGERANAL
LKGTFRLLHN ITIDPWKIGL VVKAALVILH TEHRRTA
|
|---|
| |