| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1109 |
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| Symbol | |
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| ID | 3905451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1324319 |
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| End bp | 1325155 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878441 |
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| Product | transposase, IS4 |
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| Protein accession | YP_480218 |
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| Protein GI | 86739818 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.138434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.273152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAC GCAAGCCGTA CCCCAGTGAC CTGTCCGATG AGGCGTGGGA CCTGATCCGC
CCGGTCCTCA CCGCGTGGAA GGCCCGGCAC CCCTCGGCCA GCGGGCACGA GGGCGGCTAC
GACATGCGGG AGATCGTGAA CGCGGTCCTC TACCAGGCCC GGACCGGCTG CCAGTGGCGC
TACCTGCCCC ACGACCTGCC CCCGACGTCC GCGGTGTACT ACTACTTCGG CCAGTGGCGC
GACGACGGCA CCACCGAGAC GATCCACGAC CTGCTGCGCT GGCTGGTCCG TGAGCACCAC
CGCAGGAAAG CCGACCCGAG CGCGGTCGTG CTGGACTCCC AGACCGTCCG GTCCTCCACC
AACGCCCCGA AGGGCACGAC CGGCCTGGAC CCGGGAAAGA AAAGCCCGGG CCGTAAACGC
GGGATCGCCG TCGACACGTT GGGACTGCTC ATCGCCGTGG TCGTGGTCGC AGCCAGCGTG
CACGACAACA CCATCGGCAC CGCCCTGCTG GACCGGGTCG CCGCCGCCGC CCCGCCGGTG
CGCAAGGCGT GGGTGGACGC CGGGTTCAAG ACCACCGTCG TCGAGCACGG CGCCGGTCTG
GGCATCGATG TCGAGGTCGT CGGACGCGAG CCGGGAGCGC GGGGGTTCAC CCCGCTCCCG
AAACGGTGGC GGGTCGAGCA GACCCTGGGC ACGTTGATGC TGCACCGGCG GCTGGCCCGG
GACTACGAGG CGAAACCGGC CAGCGCGGTA GCGATGATCC ACTGGTCGAT GGTGGAGGTG
ATGGCCCGCC GGCTGACCGG GGCGGCCACC CCGACCTGGC GTGACCCGCC GGTCTGA
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| Protein sequence | MAERKPYPSD LSDEAWDLIR PVLTAWKARH PSASGHEGGY DMREIVNAVL YQARTGCQWR
YLPHDLPPTS AVYYYFGQWR DDGTTETIHD LLRWLVREHH RRKADPSAVV LDSQTVRSST
NAPKGTTGLD PGKKSPGRKR GIAVDTLGLL IAVVVVAASV HDNTIGTALL DRVAAAAPPV
RKAWVDAGFK TTVVEHGAGL GIDVEVVGRE PGARGFTPLP KRWRVEQTLG TLMLHRRLAR
DYEAKPASAV AMIHWSMVEV MARRLTGAAT PTWRDPPV
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