| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1082 |
|---|
| Symbol | |
|---|
| ID | 3906425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1287818 |
|---|
| End bp | 1292149 |
|---|
| Gene Length | 4332 bp |
|---|
| Protein Length | 1443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637878416 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480193 |
|---|
| Protein GI | 86739793 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02680] conserved hypothetical protein TIGR02680 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.071648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCT CGACCCGCAT GCCCGCGACA CCGGCACCGG CCTCGATTCC CGCACCGGCA
CCGGCGTCGG CCTCGATTCC CGTACCGGCC CGGGAGGACC GCTGGCAGCC GCTGCGCGCC
GGCCTGGTCG ACCTCTTCTA CTACGACGTG GAAGAGTTCC ACTTCCACGA CGGGCGGCTG
CTGCTGCGGG GCAACAACGG TACCGGCAAG TCGAAGGTCC TGGCGCTGAC GCTGCCGTTC
CTGCTGGACG GCGAGCTGGC CGCGCACCGG GTCGAACCGG ACGGTGACCG CAACAAGCGG
ATGGAATGGA ACCTGCTGCT GGGCGGCCGG CATCCGCATC CCGAGCGGCT CGGCTACACC
TGGCTGGAGT TCGGCCGGCT GGGCGGTGAC GGCATCCCCG AGTACCGCAC GATCGGGGCC
GGCCTGAAGG CGGTCAGCGG GCGCGGCATC GTCCGGCACT GGTTCTTCGT GACCCGCCAG
CGGATCGGTC CGCAGCTGTC CCTGGTCAGC CCGACCCGGG TGCCACTGAC CAGGGACAAA
CTGAAAGAAG CCGTCGACGG CCACGGCGCG GTGTACGACA CCGCGTCGGA CTACCGCCGT
GCCGTGGACG AAGCGCTGTT CGGTCTCGGC GGGCACCGGT ACGAGGCCCT GGTCAACCTC
CTGATCCAGC TACGCCAGCC GCAACTGTCC AAGAAGCCCG ACGAGAAGCT GCTCTCCCGG
GCGCTCACCG AGGCGTTGCC GCCGCTGGAC CCCGCGCTCG TGGTCATCGT GGCCGAGGCG
TTCCGGGGTC TGGACGAGGA ACGGGAGACG CTGCGCGCCC TCGCCGAGGC GGAAACGGCT
GCGCAGGCAT TCCTGACCCA TTACCGCCGG TACGCCCGAG TGGCCGCGAA GCGGTACGCC
GCGCCGCCGC GGCAGGCGCA CAGCCGCTAC GAGCAGCACG GGCGGGATCT CGCCGAGGCC
GACGCCGCGC ATCAGGCGGC GGTCGAGGCC CTGACGGCCG CGCAGCAGGC GCTCACCGAG
GTGGAGGAGG CGAAGGCCAC ACTGACCGCC CGGCGGGACG CGCTGCGGGA CAGCCCGGAG
ATGCGCGACG CGGCGGCGCT GCGGGGCGCC GAGGAGGATG CCGGGCGGCT CGCCCGGTTC
GCCGCCCAGC GGGAGCGGGA CAGCCGGGCC GCGGCCGAGG CTGCCGGCGA CCGGAAGCGC
CGGCTCACGG GTGCGGAACG CACGGTCCAG GCCGACGCGG CGGGCTTCGA CGCCGCGGTC
CGGGCCGCCG GGCTGGCGGC CGAGGCCGCC CTGGTCACCG GCCGGCACGC CGCGGTACTC
ACCGAGCTGG ACGGCGGGGA ACCGCCGTAC CGCGACGCCC GGCGATCCGC CGAGGCCCTG
GTCGGGCAGC AGGGCACCGC CGTGAACCGT CTCGACGGGT TGCTGCGCGC GGCGGCCGAC
GCCGGCGTGG CGCTGCGCGC GGCCCGGGAC GACCTGGACC GGATCACTGC CGAGCAGCAG
GCCGCCGCCG AGCGGATCGC GGCGGCCGAG GACCTGACCG CCCAGCGCGG GGCGGGCCTC
GTCGTGGCCT GCACGGCCTA CCTGGCCGGC TGCGCGTACC TGCGGCCGGC CGACCCGGAC
GCCGCGCTGG CGGCCCTGGC CGGCTGGGTG GACACACTCG ACGGGTCCAA CCCGGTCGCC
ACCGCGGTGG ACGGGGCGGC GCGGCTGGCC ACCGCCGACC TCGGGCGCCG GCAGGCCGTC
CTCGACGGCG AGCAGACGGC CGCCCGGCGG GAACTCGAAC GGCTCGCCGA GGAGATCGAG
CGGCTGGCGG CCGGTGGCCA CGACTCGCCG CCGGCCCCGC ACACCCGCGA CGAGCACGGG
CGGGACGGCC GGGACGGCGC CCCGCTGTGG AAGGTCGTCG ACTTCGTCGA CGGCGTGCCC
GACGAGCACC GGGCCGGAAT CGAGGCGGCG CTGGAGGCCG CCGGGATCCT CGACGCCTGG
GTCGGCCCGG ACGGGCGGCT GCACGACCCC GTCAGCGACG ACGTTCTGGT CACGCCCGGG
CGGCCGGCGC CGGGGGGTGG GCTGGCCGCG GTGCTCACGC CGGCGATCGA CCGCGACGAC
GCACGCGCGG CCCGGCTGAG CGACACCGCG GTCGCCGCCG TCCTCGCGAC GATCGGCCTG
CGCGGCGGGC CCGGCCCGGC CGGCGGCTCC TTGGTCCACG GGCCGGCGGC CAACGGGACG
ACGGCCAACG GGACGACGGC CAACAGGACC TCGGGCACCG AGACCTGGGT CACCGTGGAC
GGCCGGTTCG GTAACGGGGT CCTGACCGGC GGTTGGCGCA AGGAAACCGC CGGCTACATC
GGTGAGGGTG CCCGCGAGGC GGCCAGGCGG GTCCGGCTCG ACCACCTGCG CGCCGATGCG
ACCCGGATCG AGCTACGGCT CGAAGAGCTG GCCGCGGCCG CCGCGGAGCT GGCCGACCGG
CAGCTCTCGC TGGCCGCCGA GCACGGGGCC CGGCCCTCCG ACGGCGACCT GCGCGAGGCG
CACGCGCAGC TGGCCACGGA GCACAAGGCC AAGCGGCGGA TCGACGCCCA GCACCAGGAG
GCGGCCGCTG TCGCGGCCCG CCGGCAGCAG GCCGCGGGTG AGGCGCGGGC GGCGGCCGAG
GAGTTCGCCG GCGACGTGCG CCTGCCCGCG GAGCCGGCCG CGCTGGCCGA CGTCCGGGAC
GCCCTGGGTG ACTACCGGGC GGAGCTGGCC GCGCTGTGGC CGGCGGCGGA ATCGCTGGAC
CGGTCCCGCC GCGCGGCGAC CGAGGCGGAA CACGAACTCA CCCTCGCGCT GGAACGCCAG
GAACAGACCG CCGAGGCGGT CGCCGAGGCG CAGACGCAGG CCGACGCGGC CGCCGAACGT
CACCGGGTCC TGGTCGAGAC GGCCGGCGCC GCCGTCGACG AACTGTTCCG CAAACTGGCC
GCCGTCGACA CCGAACTCGA CCGGTGCGGG CAGCGGGAGA AGCAGGCCCG GGCCGCCGAA
CGGGATGCGC TCGACGCCCG GGGCCGGGCT CACGGCCGGC GTGAGACGTT GCGGGAGGCG
ATCACCACCG CCGCGGCCGA ACGCGAGGCG GCTGTCGCGA GGCTCCGGGC GTTCGCGGCC
ACCGGCCTGC TCGCGGTCGC CGTCCCGGAC CTGGAGATCC CGGACCCGGC TGCCGGCTGG
GCACCGTACC CCGCGATCAC GCTCGCCCGG GCGGTCAACG CCGCCCTCGA CGACGTCGAC
GACACCGACC GCCGGTGGGA GCTGGCGCAG CAGCGGGTGT CGGCCGAGCA CAAGGTTCTC
ACCGACGCGC TGTCCCGGCA CGGCCACTCG GTCGGGATGG TCGTCTCCGA CGGCGTGATC
GTGGTCGACG TCCTGTTCCA GGGCCGCAAG CAGGACATCC CGGCCCTGGT CGCCGCGTTG
GAGACGGAGA CCGGGCAGCG GGCGATGCTG CTGTCCGCGA AGGAACGCGA GATCCTGGAG
AACCACCTTG TGAACGAGGT GGCCGGCGCC CTGCAGGAAC TGATCAGCGA CGCCGAGGGC
CAGGTTCGCC GGATCAACAC GGACCTCGCG CAGCGGCCCA CGTCGACCGG CATGCGGCTG
CGGTTGCAGT GGCGGGTCGC GCGCAGCGCC CCCGAGGGGC TCGGCGCGGT GCGCGACCGG
TTGCTGCGGC AGACGGCCGA CGCCTGGAGC CCCGCCGAGC GGACCGCCGT CGGCGCGTTC
CTCCAGGAGG AGATCAACCG GGAGCACAGC GCGGACACCA CCGGCGGATG GGCCGAGCAG
TTGACCCGTG CCCTGGACTA CCGCGACTGG CACGAGTTCG CTGTGCAGCG GTTCCAGGAC
GGTCAGTGGC GGCCGGCGAG CGGTCCGGCG TCCGGTGGTG AGCGGGTGCT CGCGGCGTCG
GTGCCGCTGT TCGCAGCTGC CTCGTCGTTC TACGACTCCT CCGGCAACCG GCACGCACCC
CGCCTGGTCG CCCTGGACGA GGCGTTCGCC GGAGTGGACG ACGACTCGCG GGCCAAGTGC
CTGGGTCTGC TCGCCGCGTT CGACCTCGAT GTGGTGATGA CCAGCGAGCG CGAGTGGGGC
TGCTACCCGC AGGTTCCCGG CCTGGCGATC GCGCAGCTGT CCCGCCGGGA CGGCATCGAT
GCCGTGCTCG TCACGCCGTG GCGGTGGGAC GGGCACGAGC GCACCCGCGT CGACCGGCCG
GTGCCCTACC AGCCCGAGCG GCCCGACCAA CCCGACCAGC CCCAGCTACT CGACCAGCCC
GACCAACCCG ACCAGCCCCA GCCGCTCCGT CCGGCGCAGA GCGGCAACAC CGAGCCCCTG
CCGTTCGAGT GA
|
|---|
| Protein sequence | MSTSTRMPAT PAPASIPAPA PASASIPVPA REDRWQPLRA GLVDLFYYDV EEFHFHDGRL
LLRGNNGTGK SKVLALTLPF LLDGELAAHR VEPDGDRNKR MEWNLLLGGR HPHPERLGYT
WLEFGRLGGD GIPEYRTIGA GLKAVSGRGI VRHWFFVTRQ RIGPQLSLVS PTRVPLTRDK
LKEAVDGHGA VYDTASDYRR AVDEALFGLG GHRYEALVNL LIQLRQPQLS KKPDEKLLSR
ALTEALPPLD PALVVIVAEA FRGLDEERET LRALAEAETA AQAFLTHYRR YARVAAKRYA
APPRQAHSRY EQHGRDLAEA DAAHQAAVEA LTAAQQALTE VEEAKATLTA RRDALRDSPE
MRDAAALRGA EEDAGRLARF AAQRERDSRA AAEAAGDRKR RLTGAERTVQ ADAAGFDAAV
RAAGLAAEAA LVTGRHAAVL TELDGGEPPY RDARRSAEAL VGQQGTAVNR LDGLLRAAAD
AGVALRAARD DLDRITAEQQ AAAERIAAAE DLTAQRGAGL VVACTAYLAG CAYLRPADPD
AALAALAGWV DTLDGSNPVA TAVDGAARLA TADLGRRQAV LDGEQTAARR ELERLAEEIE
RLAAGGHDSP PAPHTRDEHG RDGRDGAPLW KVVDFVDGVP DEHRAGIEAA LEAAGILDAW
VGPDGRLHDP VSDDVLVTPG RPAPGGGLAA VLTPAIDRDD ARAARLSDTA VAAVLATIGL
RGGPGPAGGS LVHGPAANGT TANGTTANRT SGTETWVTVD GRFGNGVLTG GWRKETAGYI
GEGAREAARR VRLDHLRADA TRIELRLEEL AAAAAELADR QLSLAAEHGA RPSDGDLREA
HAQLATEHKA KRRIDAQHQE AAAVAARRQQ AAGEARAAAE EFAGDVRLPA EPAALADVRD
ALGDYRAELA ALWPAAESLD RSRRAATEAE HELTLALERQ EQTAEAVAEA QTQADAAAER
HRVLVETAGA AVDELFRKLA AVDTELDRCG QREKQARAAE RDALDARGRA HGRRETLREA
ITTAAAEREA AVARLRAFAA TGLLAVAVPD LEIPDPAAGW APYPAITLAR AVNAALDDVD
DTDRRWELAQ QRVSAEHKVL TDALSRHGHS VGMVVSDGVI VVDVLFQGRK QDIPALVAAL
ETETGQRAML LSAKEREILE NHLVNEVAGA LQELISDAEG QVRRINTDLA QRPTSTGMRL
RLQWRVARSA PEGLGAVRDR LLRQTADAWS PAERTAVGAF LQEEINREHS ADTTGGWAEQ
LTRALDYRDW HEFAVQRFQD GQWRPASGPA SGGERVLAAS VPLFAAASSF YDSSGNRHAP
RLVALDEAFA GVDDDSRAKC LGLLAAFDLD VVMTSEREWG CYPQVPGLAI AQLSRRDGID
AVLVTPWRWD GHERTRVDRP VPYQPERPDQ PDQPQLLDQP DQPDQPQPLR PAQSGNTEPL
PFE
|
|---|
| |