Gene Francci3_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1066 
Symbol 
ID3905312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1270989 
End bp1271453 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID637878400 
Producthemerythrin HHE cation binding region 
Protein accessionYP_480177 
Protein GI86739777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.602871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAT ACTGCAACTG TCAGTCACTG CCGGCGATCG CGACCCTGAT CGGGGAACAT 
GACCAGGTCA CCGATCTCAT CGCCGACACG CACGAGGCAT ATCGACAGGG TGATGTCGGG
GCAATGGTGA CACTCTGTGA GCAGATGTCG GCGGTTCTCC AGCCGCATAC GGTGGTGGAG
GAGAAGGGTC TGTTCCCCGC GATGGCACTC GAGTTCCCCG AACAGATCGC GATCCTGCAG
AGCGAGCACC GCCGGATCGA GGCTGTGCTC GCCGGGGCGA CCGACGGCAC CGCCCGGGTC
GATCCCGCTT GGCCGACACG GGTCATCGAG GCGATGAGCC TGCTGCGCAG GCACATCGCG
AAGGAACAGG ACGGCGTGTT CCACGCCGCC GTCTCGATTC TCAGCAACGA ACAATGGAAC
CGTCTCGGCG AGATCCGCCA GGCGCTGAAG CTCGTAAGCT CCTGA
 
Protein sequence
MREYCNCQSL PAIATLIGEH DQVTDLIADT HEAYRQGDVG AMVTLCEQMS AVLQPHTVVE 
EKGLFPAMAL EFPEQIAILQ SEHRRIEAVL AGATDGTARV DPAWPTRVIE AMSLLRRHIA
KEQDGVFHAA VSILSNEQWN RLGEIRQALK LVSS