Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1057 |
Symbol | rpsA |
ID | 3905303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1259062 |
End bp | 1260540 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637878391 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_480168 |
Protein GI | 86739768 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.960366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGAGCA CCACCGACGT ACGACCCGTG GAGACCGTGA CCATCTCGCC CAGCCCGACC ACACCACAGG TAGCGGTCAA CGACATCGGC TCGGCCGAAG ACTTCCTTGC GGCCGTCGAC AAGACGATCA AGTTCTTCAA CGATGGCGAC ATCGTTGACG GCATCATCGT CAAGGTCGAC CGCGACGAGG TGCTGCTCGA CATCGGCTAC AAGACCGAGG GCGTGATCCC GTCCCGGGAA CTGTCGATCA AGCACGACGT CGACCCGCAC GAGGTCGTCA GTGTGGGCGA CCACGTCGAG GCCCTTGTCC TCCAGAAGGA GGACAAGGAA GGCCGCCTGA TCCTGTCCAA GAAGCGTGCG CAGTACGAGC GCGCCTGGGG CACGATCGAG AAGCTCAAGG ACGAGGACGG TGTCGTCACC GGCACCGTGA TCGAGGTCGT CAAGGGTGGT CTCATCCTCG ACATCGGCCT GCGTGGCTTC CTGCCGGCTT CGCTTGTGGA GATGCGCCGG GTCCGCGATC TGCAGCCCTA CGTGGGCCGC GAGCTCGAAG CCAAGATTAT CGAGCTGGAC AAGAACCGCA ACAACGTTGT GCTCTCGCGG CGGGCCTGGC TCGAACAGAC CCAGAGCGAA GTCCGTTCCG AGTTCCTCGC CCAGCTGGCC AAGGGCCAGA TCCGCAAGGG CGTGGTCAGC TCCATCGTCA ACTTCGGCGC CTTCGTGGAC CTCGGTGGTG TGGACGGCCT CGTGCACGTC TCCGAGCTGT CCTGGAAGCA CATCGACCAC CCGTCCGAGG TGGTCGAGGT CGGCCAGGAG GTTACCGTCG AGGTCCTCGA TGTCGACTTG GACCGCGAGC GGGTCTCGCT GTCGCTGAAG GCGACGCAGG AGGACCCGTG GCGTCAGTTC GCCCGGACCC ACGCGATCGG TCAGGTCGTT CCAGGCCGGG TCACGAAGCT GGTGCCGTTC GGTGCGTTCG TCCGGGTGGA CGAGGGCATC GAGGGTCTGG TCCACATCTC CGAGCTGGCC GAGCGGCACG TGGAGATCCC CGAGCAGGTC GTGAACGTCG GTGACGAGAT CCTGGTGAAG GTCATCGACA TCGACCTCGA CCGCCGCCGC ATCAGCCTGT CGCTCAAGCA GGCGAACGAG GCGACAGGGC TGGCTGTCGA CGGCGAGGCG TTCGACCCGA GCCAGTACGG CATGGAAGCC AAGTACGACG AGCAGGGTAA CTACGTCTAC CCCGAAGGCT TCGACCCCGA GACCGGGGAA TGGCTCGAAG GTTACGAGGA GCAGCAGGCG GAATGGGAGC GGCAGTACGC CGAGGCCCAG GCCCGCTTCG AGGCGCACCA GGTCCAGATC CGGGCCGCGC AGGAGGCCGA TGCCGCCGCG GCGGCCCCCT CCTCCTACAC CTCCCAGTCC GAGCAGCCTT CCTCGGCGAT CGATGAAGAG GCGCTGCGTC GGCTGCGTGA GCAGTTCGGT CGGGAGTAG
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Protein sequence | MTSTTDVRPV ETVTISPSPT TPQVAVNDIG SAEDFLAAVD KTIKFFNDGD IVDGIIVKVD RDEVLLDIGY KTEGVIPSRE LSIKHDVDPH EVVSVGDHVE ALVLQKEDKE GRLILSKKRA QYERAWGTIE KLKDEDGVVT GTVIEVVKGG LILDIGLRGF LPASLVEMRR VRDLQPYVGR ELEAKIIELD KNRNNVVLSR RAWLEQTQSE VRSEFLAQLA KGQIRKGVVS SIVNFGAFVD LGGVDGLVHV SELSWKHIDH PSEVVEVGQE VTVEVLDVDL DRERVSLSLK ATQEDPWRQF ARTHAIGQVV PGRVTKLVPF GAFVRVDEGI EGLVHISELA ERHVEIPEQV VNVGDEILVK VIDIDLDRRR ISLSLKQANE ATGLAVDGEA FDPSQYGMEA KYDEQGNYVY PEGFDPETGE WLEGYEEQQA EWERQYAEAQ ARFEAHQVQI RAAQEADAAA AAPSSYTSQS EQPSSAIDEE ALRRLREQFG RE
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