| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1000 |
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| Symbol | |
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| ID | 3906686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1189981 |
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| End bp | 1191759 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637878333 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_480112 |
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| Protein GI | 86739712 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCC AGCTCAACGG CACGAAGGTC GGAGTTGTCG GGCTCGGCAC GATGGGCGCC
GGCATCGCCG AGGTAATGGC GCGCGCCGGC ATCGAGGTGG TCGGCGTCGA GCTCAACGAC
GAGACGCTGG CCCGTGGGCT CGATCGGATC CGGCACTCCA CGGACCGGGC GATGAGCCGC
GGCAAGTTGA CCAAGGTCGA GCGGGACGCC CTGCTCGCCC GTATCCAGGC CGGAACCGGG
ATCGAGGCCG TGGCCGACTG CCAGCTGGTC ATCGAGGCGA TTCCCGAGCG GATCGAGAAG
AAGCTCGGGC TCTTCGCCGA GCTGGACAGG CTGTGTCCGC CAGAGACGAT CTTTACGACG
AACACCAGCT CCCTGCCAAT CATCACGTTG GCCGTCGCTA CCTCACGCCC CTCCCGGGTT
GTCGGGACCC ACTGGTCCAA CCCCGCACCG GTCATGGGCC TGGTCGAGAT CATCCATACT
GCGGTCACCG ACCCGTCTGT ACTGGAGGAT GTCGGGACGC TCGTCGCGAA GGTCGGAAAG
ACCGCGGTGG TCGCCGGGGA CCGGGCGGGT TTCATCGTGA CCGCCCTGCT GTTCGGGTAC
CTTAACAGCG CTGTCCGGAT GCTGGAGGCG TGCTACGCCA CCCGTGAGGA CATCGACGCC
GCCATGCGGT TCGGCTGCGG TCACCCGATG GGCCCATTGG CACTGCTCGA TCTGATCGGT
CTCGACTCCG CGTACGAGAT TCTCGACTCG ATCTATCACA CCTCCCGCGA CCACCTGCAC
GCACCGGCCC CGCTGCTCAA GCAGCTAGTG ACCGCCGGCA TGCTCGGCCG CAAGACCGGG
CGGGGTTTCT ACACCTATGC CGCCCCTTAC TCCTCCGAGA TCGTCGACAT GGTCGAACCA
CCCCAACTCG GCTTCTTCGC GGTCCCAGGA CGGCCGGTGC ACACGATCGG CGTGGTCGGC
ACCGGCACCA TGGCCAGCGG AATCATCGAG GTCTGTGCCC ACCATGGCTA CAAGGTGGTG
TTCCGTGCAC GGAGCGAGAA GAAAATCGCC GCTGTCCGGA CGAAGATCGA GCGGTCACTG
GACAAAGCGG TCGAACGGGG AAAGATCTCA TCGGACGAGC GTACTTCGAC ACTGGCACGG
GTTCGAGCTT CGACCGATCT GTCCGTCCTC GCCGAGTGTG ACCTCATCAT CGAAGCGGTC
GTTGAGGACT TGGACGTCAA ACGGGCGCTG TTCGCTGAAC TCGACACGGT TGCACGCCCG
GGAGCGGTCC TCGCGACGAC CACGTCCTCG CTGCCAGTGA TCGAGTGTGC CACCGCCACG
TCCCGCCCGC AGGATGTGGT CGGTATGCAC TGGTTCAACC CAGCGAAGAA GATGCGCCTG
GTCGAGATCG TGCCGACCAT CGTAACCGCG GACGACGTGA CCGCGACTGT CTTCGACGTG
GCCAGGACGG CGGGCAAGTA CCCGGTCCGG TGTGCCGACC GCGCCGGCTT CATCGTCAAC
ACCCTACTGT TCCCATATCT CAATGACGCG GTGAAGATGC TGGAGTCCCA TTACGTGGAT
ATCGATGTGA TCGATACAGC CATGAAGGTC GCCTGCGCAC ACCCGATGGG GCCGTTCGAA
CTCGCCGATG TCATCGGCCT GGACGTGACA CTCGCCATCC AGCGCGCCCT GTACCGGGAG
TTCCGCGAAC CCGGGTACAC CCCGACGCTC CTGCTGGAAG ACCTCGTCAG GTCCGGATGT
CTGGGGTACA AGACCGGGCG GGGTTTCCGG GTCTACTGA
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| Protein sequence | MDIQLNGTKV GVVGLGTMGA GIAEVMARAG IEVVGVELND ETLARGLDRI RHSTDRAMSR
GKLTKVERDA LLARIQAGTG IEAVADCQLV IEAIPERIEK KLGLFAELDR LCPPETIFTT
NTSSLPIITL AVATSRPSRV VGTHWSNPAP VMGLVEIIHT AVTDPSVLED VGTLVAKVGK
TAVVAGDRAG FIVTALLFGY LNSAVRMLEA CYATREDIDA AMRFGCGHPM GPLALLDLIG
LDSAYEILDS IYHTSRDHLH APAPLLKQLV TAGMLGRKTG RGFYTYAAPY SSEIVDMVEP
PQLGFFAVPG RPVHTIGVVG TGTMASGIIE VCAHHGYKVV FRARSEKKIA AVRTKIERSL
DKAVERGKIS SDERTSTLAR VRASTDLSVL AECDLIIEAV VEDLDVKRAL FAELDTVARP
GAVLATTTSS LPVIECATAT SRPQDVVGMH WFNPAKKMRL VEIVPTIVTA DDVTATVFDV
ARTAGKYPVR CADRAGFIVN TLLFPYLNDA VKMLESHYVD IDVIDTAMKV ACAHPMGPFE
LADVIGLDVT LAIQRALYRE FREPGYTPTL LLEDLVRSGC LGYKTGRGFR VY
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