| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0978 |
|---|
| Symbol | |
|---|
| ID | 3905834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1156947 |
|---|
| End bp | 1157912 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637878312 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_480091 |
|---|
| Protein GI | 86739691 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.323902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAACC CTTACGAAAC AAGGAATGCC CGGGTCCCGT CCGGCGGCTC GGCACGGACA
CGACGACGAG CACGACGAGC ACGACGAAGC GGAGCATTAC GAAGCGGAGA CATCCGAACC
GATCATGGCC GGGACGGCCG TCGCCTTACC TATCGTGGCT GGGTGGCCCG TGTGCTCGTC
GTTGACGACG ACGCCCTCGT CTCCGAGGTG GTTGACCGCT ACCTGCGCAA CGCCGGCTTC
GACGTCGACC GCGCCGCGGA CGGACCCACG GCCCTGCGGG TGGCCGAGAC AACCCCACCG
GACCTCGTCG TCCTCGACCT GATGCTGCCC GGTCTCGATG GCATCGAGGT GTTCCGCCGG
CTCCGGGCGC ACCGACCGGT ACCAGTGATC ATGCTGACCG CACGTGCCGA CGAGTCGGAT
CGCATCACCG GTCTGGAGAT CGGCGCCGAC GACTACGTGA CCAAGCCGTT CTCGCCGCGG
GAGCTGACCC TGCGCGTGCA GTCGGTGCTG CGGCGGGCGA ACGAGACGGT GCCGGGCGCG
GAAGCCGGCG TCCTGCGGGC CGGCACCCTC GTCGTCGACG CGGCCGCGCG GACCGCCACC
CGGCACGGGG TTCCGCTCGG GCTGACGGTG CGCGAGTTCG ATCTGCTGGC CTTCCTGCTG
CGCCGGCCCG GCCGGGCCTT CACCCGGGGC GAGCTGCTCG AACACGTGTG GGGATGGAGC
TATGGCGACC CCTCGACGGT CACCGTGCAC ATCCGTCGAC TGCGGGAGAA GATCGAGGAT
GATCCGACCG CGCCCCGGAT GCTTGTCACG GTGTGGGGGG TCGGGTACCG CTACGATCCC
GGCACCCCGC GCCCCGACAG CACCCCGCGC CCCGACAGCA CCCCGCGCCC CGACAGCACC
CCGCGCCCCG ACAGCACCCC CACCGGACAG GTGGCGGCAC CGGACGAGGG ACGACACCGA
GGATGA
|
|---|
| Protein sequence | MINPYETRNA RVPSGGSART RRRARRARRS GALRSGDIRT DHGRDGRRLT YRGWVARVLV
VDDDALVSEV VDRYLRNAGF DVDRAADGPT ALRVAETTPP DLVVLDLMLP GLDGIEVFRR
LRAHRPVPVI MLTARADESD RITGLEIGAD DYVTKPFSPR ELTLRVQSVL RRANETVPGA
EAGVLRAGTL VVDAAARTAT RHGVPLGLTV REFDLLAFLL RRPGRAFTRG ELLEHVWGWS
YGDPSTVTVH IRRLREKIED DPTAPRMLVT VWGVGYRYDP GTPRPDSTPR PDSTPRPDST
PRPDSTPTGQ VAAPDEGRHR G
|
|---|
| |