Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0977 |
Symbol | |
ID | 3905833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1155743 |
End bp | 1156882 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878311 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_480090 |
Protein GI | 86739690 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG ACCTGGAGGT CATGGGGATC GCGCTCGGCT GTTCGACGGC GGCCGCGCTC ACCGGCCTGC CGTTGCTGCG GGCGCTCCGG AGGCGGCCAT TGTGGGCGAC AGCAGCGTCA TTGAGCGTGA TACCGGTCGT CGCGGTGACG GTGGGGGTCG CCGGCACGGC ACAGGCAATG TTCCTCTCCG ATCATGACTT GCGGGTCGTG CTCATCGTGG TGGTCGTGTC GGCGGTGGTG GCGTCGGCAT CCGCGGTGCG CCTGGGTGGC CCGGTCGTGG CGGCGATCGG GACGCTGACC CGGGCGACGG CGGCCCTGGG CGAGCCGGGC TATCACGGCG CCGACCGTGT TCCGACCGCC GAGCTCGGCG CGCTGGCGAC GACCCTGGAC GCGACCCATG TCCGCCTCGT CGAGGCGCGG GAACGGGAAC GGGCACTGGA GGCAAGTCGC CGCGAGCTGG TGGCCTGGAT CAGTCATGAC CTGAGAACCC CGCTCGCGGG AATCCGGGCG ACGGCCGAGG CCCTGCAGGA CGGCCTGGTC ACGGACGCCG AGACGACGGC CCGCTACCAC CGGCTGATGC TCGCCGACGC CGAGCGGCTG ACCGGCATGG TCGACGACCT GTTCGAACTG GCCCGGCTGC AGGCCGGTGC GCTGCGGCTG AGTCTGGAGA AGGTGCGCGT CGCCGACGTC GTCTCGGACG CGATCGCCGC GGTGGACCCG ATCGCGCGGG CCAAGGGAGT CGTCGTCAAC GGGCGGGCCG ACCACGCCGG GTACGTTGAC GCCGACGCGG CCGAGGTGGG GCGCGTGCTG ACCAATCTCC TCGTCAACGC CATCAGGCAC ACCCCCGACG ACGGAACGGT GGAGATCACC GCTACCGCGG ACGCCGACCG GGCGGTCTTC GCCGTGGCGG ACCGGTGCGG CGGCATCCCG CAGGAGGAGC TGCCCCGCGT GTTCGACCTC GGATTCCGGG GCGAGTCGGC CCGGACCCCC GGTGGTGACG ACCATCCGCA CCAGCCACGG ATGCGGTCGG GGATCGGCCT CGCGATCGTC CGTGGCATCG TCGAGGCGCA CGGGGGCGAC GTCACCGTGC ACAACCATCG GGAGGGCTGC CGCTTCGTCG TCGCGCTTCC CACGTCCTGA
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Protein sequence | MNADLEVMGI ALGCSTAAAL TGLPLLRALR RRPLWATAAS LSVIPVVAVT VGVAGTAQAM FLSDHDLRVV LIVVVVSAVV ASASAVRLGG PVVAAIGTLT RATAALGEPG YHGADRVPTA ELGALATTLD ATHVRLVEAR ERERALEASR RELVAWISHD LRTPLAGIRA TAEALQDGLV TDAETTARYH RLMLADAERL TGMVDDLFEL ARLQAGALRL SLEKVRVADV VSDAIAAVDP IARAKGVVVN GRADHAGYVD ADAAEVGRVL TNLLVNAIRH TPDDGTVEIT ATADADRAVF AVADRCGGIP QEELPRVFDL GFRGESARTP GGDDHPHQPR MRSGIGLAIV RGIVEAHGGD VTVHNHREGC RFVVALPTS
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