Gene Francci3_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0973 
Symbol 
ID3903880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1150114 
End bp1150914 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID637878307 
Productmethyltransferase type 11 
Protein accessionYP_480086 
Protein GI86739686 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATA ATGCTGCCCA CGTACGGACC AACCGTGCCC GCTGGAACGA GATCTCTGAC 
GACTACCAGC GACTGAACGC CCCGCAGATC CGCCGGCAGG TGTTCACCGG CGACATCTCC
TGGGGGCTAT GGGCCGTTCC GGAATCACGG CTCGGCGTGC TCGGTGAGGT CACCGGACGG
GACATCCTGG AGATGGGCTG CGGGGGCGGC CAGTGGTCGA GCGCGCTGGT CCGGCGGGGG
GGCCGACCGA TCGGCTTGGA CCTCTCCGAA CGGCAGCTGC ACCACAGCAG ACAGCTCGCC
GCGGAGACCG GGCTGTCCTT CCCCCTGATC CAGGCGAGTG CTGAGGCGGT GCCCTTCGCC
GACGACTCGT TCGACATCGT CTTCGCCGAC CACGGCGCCT TCTCCTTCGC GGACCCCTTC
CGGGCCGTGC CGGAAGCCGC ACGCGTGCTG CGCCCCGGCG GCCTGCTCGC CTTCAGCCAC
GTCAGCCCGA TCTACGAGAT CACCGTGGCG CCGGGCCGGG ACGCCCCTGG CAGTCGCCTG
ACCCGCGACT ACTTCGGGCT GCGTTTGCTG GCCGAGGCCG ACGGCCTGGT CAGCGCCAAC
CTTCCCTACG GCACCTGGAT CAGGCTCTTC CGGGACAACG ACCTCGTCAT CGAAGATCTT
CTGGAACCCC GCCCGGCACC GCCGGCATCC GACAGTCACA GCGAGGAACC GGCACCCGCC
CAGCCCGAAC GCGGCGACAA GGCATGGGCG CGCCGCTGGC CCTCCGAATG CATCTGGCGG
CTACGCAAGC CGACGCGGTG A
 
Protein sequence
MINNAAHVRT NRARWNEISD DYQRLNAPQI RRQVFTGDIS WGLWAVPESR LGVLGEVTGR 
DILEMGCGGG QWSSALVRRG GRPIGLDLSE RQLHHSRQLA AETGLSFPLI QASAEAVPFA
DDSFDIVFAD HGAFSFADPF RAVPEAARVL RPGGLLAFSH VSPIYEITVA PGRDAPGSRL
TRDYFGLRLL AEADGLVSAN LPYGTWIRLF RDNDLVIEDL LEPRPAPPAS DSHSEEPAPA
QPERGDKAWA RRWPSECIWR LRKPTR