Gene Francci3_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0959 
Symbol 
ID3903866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1132523 
End bp1133056 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID637878293 
Producthypothetical protein 
Protein accessionYP_480072 
Protein GI86739672 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.498536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGCG TCGAGTTGAC CTTGGAGGAG CGGGAGGCGA TCTCCAGGGG CTTGGCCGAG 
GGACTGTCAC ACCGGATGAT CGCGGCCCGG CTGGACCGAA ACCAGTCGGT GATCAGCCGT
GAGGTCGCGC GCAACGGCGG CAATGCCGGA TACCGCGCCG CGGACGCGCA GAAACGCGCC
GACGAGCGGC GGCGGCGACC GAAGGCGTTC AAGCTGGAAA CTCACGTCCG GCTGCACGAC
GCGGTGGCCG AACGGCTGTC GGCCGACTTC TCGCCGGAAC AGGTGTCTAA TCGGCTGAAG
AAGGATTTCC CGGATGATCC GGAGATGCGC GTGTCGCACG AGACGATCTA CCAGACGCTC
TTCGTTCAGG CGCGTGGCGA ACTGAACACG CGGCTGAAGC TCGCGCCGCG GTCGGGCCGG
GCGGAGCGCC GGCCGCGGGG GTCGACTCGG CCGAAGCAGG CCAGGATCGC CGGCATGGTC
GGCATCTCCG AGCACTCTGC CGAGGCCGCC GACCGCGCGG TACCCGGCCA CTGA
 
Protein sequence
MRGVELTLEE REAISRGLAE GLSHRMIAAR LDRNQSVISR EVARNGGNAG YRAADAQKRA 
DERRRRPKAF KLETHVRLHD AVAERLSADF SPEQVSNRLK KDFPDDPEMR VSHETIYQTL
FVQARGELNT RLKLAPRSGR AERRPRGSTR PKQARIAGMV GISEHSAEAA DRAVPGH