Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0912 |
Symbol | |
ID | 3906288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1056109 |
End bp | 1056600 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637878246 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_480025 |
Protein GI | 86739625 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.456299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAGA CCGCCAACGC CGCCCGTCTG GTCCCCGGCG ACATCGCACC CGACTTCACC CTGCCCGACT CCGAGGGGAA CGAGGTGTCC CTGGCGTCCT ACCGGGGACG GCGGGTCGTC GTCTACTTCT ATCCGGCCGC GTCGACCCCG GGGTGCACGA AGCAGGCCTG CGACTTCCGG GACAGCCTCG CCCAGCTCGA CAACGCCGGC ATCGACGTGC TCGGGATCTC TCCCGACAAG CCCGCCAAGC TGGTGAAGTT CCGCGACGCG GAAGCCCTGA CGTTCCCGCT GCTTTCCGAC CCGGAGCGGA AGGTGCTCGC CGCGTACGGC GCCTTCGGCG AGAAGACAAT GTACGGGAAG AAGACCATCG GCGTGATCCG CTCGACGTTC GTGATCGGCA CGGACGGCAC GATCGAGGTG GCGCAGTACA ACGTCCGCGC GACCGGTCAT GTCGCCAAGC TGCTGCGCGA TCTGGGCCTC GCAGCCGCCT GA
|
Protein sequence | MTETANAARL VPGDIAPDFT LPDSEGNEVS LASYRGRRVV VYFYPAASTP GCTKQACDFR DSLAQLDNAG IDVLGISPDK PAKLVKFRDA EALTFPLLSD PERKVLAAYG AFGEKTMYGK KTIGVIRSTF VIGTDGTIEV AQYNVRATGH VAKLLRDLGL AAA
|
| |