Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0909 |
Symbol | |
ID | 3906284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1052613 |
End bp | 1053278 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637878242 |
Product | hypothetical protein |
Protein accession | YP_480022 |
Protein GI | 86739622 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAAGG ACATTCTGAC ACGAGTCCGG GAGATCATTC CGGTGCGAGC CATCACCCAG GGCGAGGCCC TGATCTTGGC GGAGCGGCAG GCAGCGCTAC TGCTCCAGCT CCTCGCCATC CGCGCAGTTC CAGTCGATGT CTTCAAGATC AGCGAACTGC CGAACGTCGA GGTGCAGGTG AAGCCGCGAT ACGAGATGTC GGCCATCGCT GAGCTACCGG AGACCTCGGA AGTCGGTGGT GTCACGCATA TGCGACGCGA TGGTCGAACG GTTTTTACCA TAAACCGCGA GGACCCCGTG GGCCGGCGGC GTTTTAGTCT GGCGCATGAG GTGAAGCACC TCATCGACGA TCCCGCGGTC GAGATCATGT ACGCCAAGTT CGGGTACGGG AAGCCCGAGA ATCGGGCGCG GCAGATCGAG CGGGTGTGCG ATCACTTCGC CGCCTGCTTC CTCATGCCGC GGACGGTGCT CAAACGAGCC TGGGTGAACG GGCTCCAAGA CCTCGAAGCC CTCGCGGAGC AATTCAAGGT GTCGATGTCG GCTATGCAGA TTCGTCTGAA GTACCTCGGC CTGACGGACG AGGAGGAGCG GCCAGCCTCG GAATACTTCC GGCTGGACGG ACCGTCCTTG ATCTTCGGGG CTGACTGCCC CGACGTGGCA GCCTAA
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Protein sequence | MNKDILTRVR EIIPVRAITQ GEALILAERQ AALLLQLLAI RAVPVDVFKI SELPNVEVQV KPRYEMSAIA ELPETSEVGG VTHMRRDGRT VFTINREDPV GRRRFSLAHE VKHLIDDPAV EIMYAKFGYG KPENRARQIE RVCDHFAACF LMPRTVLKRA WVNGLQDLEA LAEQFKVSMS AMQIRLKYLG LTDEEERPAS EYFRLDGPSL IFGADCPDVA A
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