Gene Francci3_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0909 
Symbol 
ID3906284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1052613 
End bp1053278 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID637878242 
Producthypothetical protein 
Protein accessionYP_480022 
Protein GI86739622 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAAGG ACATTCTGAC ACGAGTCCGG GAGATCATTC CGGTGCGAGC CATCACCCAG 
GGCGAGGCCC TGATCTTGGC GGAGCGGCAG GCAGCGCTAC TGCTCCAGCT CCTCGCCATC
CGCGCAGTTC CAGTCGATGT CTTCAAGATC AGCGAACTGC CGAACGTCGA GGTGCAGGTG
AAGCCGCGAT ACGAGATGTC GGCCATCGCT GAGCTACCGG AGACCTCGGA AGTCGGTGGT
GTCACGCATA TGCGACGCGA TGGTCGAACG GTTTTTACCA TAAACCGCGA GGACCCCGTG
GGCCGGCGGC GTTTTAGTCT GGCGCATGAG GTGAAGCACC TCATCGACGA TCCCGCGGTC
GAGATCATGT ACGCCAAGTT CGGGTACGGG AAGCCCGAGA ATCGGGCGCG GCAGATCGAG
CGGGTGTGCG ATCACTTCGC CGCCTGCTTC CTCATGCCGC GGACGGTGCT CAAACGAGCC
TGGGTGAACG GGCTCCAAGA CCTCGAAGCC CTCGCGGAGC AATTCAAGGT GTCGATGTCG
GCTATGCAGA TTCGTCTGAA GTACCTCGGC CTGACGGACG AGGAGGAGCG GCCAGCCTCG
GAATACTTCC GGCTGGACGG ACCGTCCTTG ATCTTCGGGG CTGACTGCCC CGACGTGGCA
GCCTAA
 
Protein sequence
MNKDILTRVR EIIPVRAITQ GEALILAERQ AALLLQLLAI RAVPVDVFKI SELPNVEVQV 
KPRYEMSAIA ELPETSEVGG VTHMRRDGRT VFTINREDPV GRRRFSLAHE VKHLIDDPAV
EIMYAKFGYG KPENRARQIE RVCDHFAACF LMPRTVLKRA WVNGLQDLEA LAEQFKVSMS
AMQIRLKYLG LTDEEERPAS EYFRLDGPSL IFGADCPDVA A