Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0785 |
Symbol | |
ID | 3905721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 912238 |
End bp | 915720 |
Gene Length | 3483 bp |
Protein Length | 1160 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637878118 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_479898 |
Protein GI | 86739498 |
COG category | [R] General function prediction only |
COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCTG CGCCACGGTT TCATCGGGTC GCCGCACTGC AGCGGCGTTT CGTGGACCGC GAACCGGTGC TGGCGGCTTT CGCCGAAGAG CTGACCCATC TAGGTGACGG TCCACGGGTC TTCAACGCCA TCGGCGTGGG CGGTATAGGT AAGTCACGAC TACTGCGCGA GTTGAAGGAC CGGGCGGCAA CCCGGTATCG AACGGCATCA CTCGATCTGC AGGTGCACTC GTTGCGCCAG CAGGAAGACG CGCTGGCGGT GCTACGCAAC GAACTGGGGT CGCAAGGGGT ACACTTCGAT CGCTTCGACA TCGCCTACGC AGTGCTGTGG CAGCGGCTAC ACCCACATCT GCGGTTGAAC CGTTCGGAAC TGGCATTCGT CGACGAGAGT TCCATTCTCG CGGATATCGC CGACACGATG ACCGGAATTC CGATTTTCGG TACGGCCCGC GGCCTTATCA AGCTGTTGGA GCGTGGCGGC TGCGACATAC GCCGCCGCCT GCGGGTGCGG CGCGATCCCA CCCTGGCGAC ACTCGACGAC CTGCCGAACA GTGAGCTCGC CGACGCCGTC ACGTTTCTGT TCGCTGAAGA CCTTCGGGCT GCCAGCCAGG ACAGACAGTA TGTGATCATC CTTGACAGCC ACGAGGCACT GGTGCCGAGC CCGGTACGCA CCGGACGGGC GCAACTCGCG GATGCCTGGC TACGTGATCT CGTGGCACAG CTCGACCGCG GCCTGGTGGT CATCGCCAGC CGGGAACCGT TGCGGTGGGA ACTGACGGAT CCCGACTGGG ACGGCCTCAT CGAGATATGC GACATCGGCG GCCTGCCCAT GGAAGCCCGG CTGGAACTCC TCGACACCGG TGGGATCACC GATCCGTTCC AGCGCCAGAC AATTGCGGAC GCCAGCGCAG GTCTCCCATT CTATCTGAAC CTGGCGGTGG ACACGCACCT GCAGACCGGT GGGCGGGTCA GCGGTGCCCT CGTGTCCCAG CAGGAGATCT TGGCGCGCTT TCTTCAGCAT GTCGCCCCGG AAGAGATTCG ATCACTGGAG GTCCTGAGCC CGGCGCGAAT CTTCGACTAT GATATTTTTC GGATGCTGAC GGCCACGTTC CATCTCCCGG GACATCGCAT CGCCTGGGAA TCCCTCACCG CATATTCATT CGTATACCCG GCGAACACCG CGCTGCGGTT TCATCAGCTC ATGGCCGCAG CCCTGCGGGA ACGGCTTTCT CCGGGCACTA CCACCGACAT CCACGCCCTG CTACAGGGAC TGTGGGAGAA CCGGGCCGAC CAGGCGACCG GCCAGGACAG CGGCGCTCAT GCCGCCCGCG CCCTGCGGGA GGCCGCGTAT CACGCCCTGC GGGGTCGGCA GATCAGCGGC GAGAGCATCC TCGGCTATGC CGACCACGCG GTTCGCCGTG GGGGACACAG CGCAGCCCAA GGCATCACCG AGGACCTGCG CGCCCGGCTC AACGACCAAC CCGACCACGA CAACCTGCCC GAAGCGCTGC GGTGCCTGCA GGCTGAGGCG GCGATTCGCC TCGGCGACGC GGCCACGGTC ACGGCGCTGG TTCCCGAACC GGTCACCGCT CTGGCCATCG ACACAATGGT CGGCGCGCGG CTCGCCGTGG CCGCCGGACA TGGTCGACGC ATCGCCGGTG AGACCCGGGC CGCGCTCGAC GCCTACACCC AGGTCTGGGA CCACGCCACG GGGGCATCCC GGCTGACCGC GGGCCTGTGG GCCGCCGACC TTCACATGGC CCAGGGCCGG TTCCGAGACG CGGAAGCACT CGCCACCGAC CTGAGTGCGT CCGCTCCGGG GCAGGACACC GAGTTTCACG GAGACGTGGC CCGGATGCGT CACCTCGCCC ACCGGTTCGC GTTCGAGTTC GACGCCGCCG CCCGCTATCT CGACGAGGCC GCCGCCCACT ACGCCGCAGC CGATAGCGTT CTCGGGTTGG CCAACATCCA GACCAACCGG GCCGAACTCC TCGCCTATAC CCACCCTGCC GAGGCCATCG TCGAGGCAGG CCAGGCGATC GAGATCCAAC GCGAGATCGG CGCCCATCAC GAGCTCGGCA AGGCGTATAC CGCTCTCGCC ATCGGGCAGC TCCGATGCGG TCAGCTCGAC GAGGCCGAGA CCTCCCTACG GTCCGCGTGC GCCGCCCTCG ATGGGGTCGG GTATCGCTCC GGTCGAGCCC GCGCCGAGTT CTACCGCGCC CTGGTCCATG CTCGCCGGGG TCAGCTCGAC GAAGCGGTTT CCTCGCTCCA GTGGAGCGTC CGCGAGCTGG AAGCAGCCGA CGTCTACCCG ACAATCATCC TCTGCTCGGC GCACGCACTG TCCATCCTCG GCATCGATGA CGGGCAGGTG ACCGCCGCCG CGAGCCGGGC ACGGGCAGGA ATCCAGCCGT TCGGCACGCT TACCGATCTT GACGCCCGCG TCGAGGACTT CGTCGCCGAC CTGCTCAACG GGCACACGTG GCGGCCCGAC GAACTGTACC GGCAGGCGGT CGGGCGCCCC GATGCCGCGT CGGGTTTCTA CAATCACAAC ATCCGGATGG ACACGCCGGC CGGAGACGTG ATTGTTCGTA TCCCGATTCC GGGCAGCGAC ATCATGGACC TGATGATCTG GCCGGAAGGG GACGTGCTGC GCGCCATCCG CGGGACCGTG ACCCACGCGC CCCGTCTGCT CTACGCCCGC ATGCAGCCCC GCTATCAGAT CGTGGAATTC CTTCCCGGTC AGCTCCTCGA CAACACCGCA CCACGCGGCA CCCGTGTCCC CGACCACGTC ATCGGCGACG TCGTGGAACT CTTCGGGCAG CTCGGCCTCG TCCCGCGCGA ACGCCTGCCG CAATCGCCGC CAGGCTGGCC GGCGGACGGG CGGACCGCCG ACTTCGCCCG CCGCCTGTCC GCTGTCACCG CAGGCGTGCA TTCCCGGTTC CTTCCCGACT TCGGCGATCT GTACGCCGAG TTCGGCATCC CCATCGACGC GCTCACCGAG ATCAACAGTC GATGGACGAC GCTGCACCCG CGGCCTTTCC GCCTTCTCCA TACCGACATC CACCGCAAGA ACATCATCAT CTCGGATGGC CAAGCCTACT TCCTCGACTG GGAACTCGCC CTGTGGGGCG ATCCGGTCTA TGATCTTGCG GTCCACCTGC ACAAGATGAG CTACCAGCCC GACGAGTCAG CCGCACTCGT CCATGGGTGG ACCTCCGTTG TCAACGGTCC GGCCACCGAG GGATGGCAGT CAGACCTCGA CACCTACCTC TCCCACGAAC GGGTGAAGTC CGCCATCGTC GACACCGTCC GCTACACAAA AATCATCACC GAAGGAAACC TCAGCCGCGA TGACACACAT GCATTCATCG ACAAGCTCGT CAGGAAACTC GCCGCCGCGC ACGCCGTACT CAGCAACCGA GTTACCATCG ACCACGAGGC CGCCGCAGCC CTCATACAGC AGTGGGCCGG CAGACGCCGA TAG
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Protein sequence | MAPAPRFHRV AALQRRFVDR EPVLAAFAEE LTHLGDGPRV FNAIGVGGIG KSRLLRELKD RAATRYRTAS LDLQVHSLRQ QEDALAVLRN ELGSQGVHFD RFDIAYAVLW QRLHPHLRLN RSELAFVDES SILADIADTM TGIPIFGTAR GLIKLLERGG CDIRRRLRVR RDPTLATLDD LPNSELADAV TFLFAEDLRA ASQDRQYVII LDSHEALVPS PVRTGRAQLA DAWLRDLVAQ LDRGLVVIAS REPLRWELTD PDWDGLIEIC DIGGLPMEAR LELLDTGGIT DPFQRQTIAD ASAGLPFYLN LAVDTHLQTG GRVSGALVSQ QEILARFLQH VAPEEIRSLE VLSPARIFDY DIFRMLTATF HLPGHRIAWE SLTAYSFVYP ANTALRFHQL MAAALRERLS PGTTTDIHAL LQGLWENRAD QATGQDSGAH AARALREAAY HALRGRQISG ESILGYADHA VRRGGHSAAQ GITEDLRARL NDQPDHDNLP EALRCLQAEA AIRLGDAATV TALVPEPVTA LAIDTMVGAR LAVAAGHGRR IAGETRAALD AYTQVWDHAT GASRLTAGLW AADLHMAQGR FRDAEALATD LSASAPGQDT EFHGDVARMR HLAHRFAFEF DAAARYLDEA AAHYAAADSV LGLANIQTNR AELLAYTHPA EAIVEAGQAI EIQREIGAHH ELGKAYTALA IGQLRCGQLD EAETSLRSAC AALDGVGYRS GRARAEFYRA LVHARRGQLD EAVSSLQWSV RELEAADVYP TIILCSAHAL SILGIDDGQV TAAASRARAG IQPFGTLTDL DARVEDFVAD LLNGHTWRPD ELYRQAVGRP DAASGFYNHN IRMDTPAGDV IVRIPIPGSD IMDLMIWPEG DVLRAIRGTV THAPRLLYAR MQPRYQIVEF LPGQLLDNTA PRGTRVPDHV IGDVVELFGQ LGLVPRERLP QSPPGWPADG RTADFARRLS AVTAGVHSRF LPDFGDLYAE FGIPIDALTE INSRWTTLHP RPFRLLHTDI HRKNIIISDG QAYFLDWELA LWGDPVYDLA VHLHKMSYQP DESAALVHGW TSVVNGPATE GWQSDLDTYL SHERVKSAIV DTVRYTKIIT EGNLSRDDTH AFIDKLVRKL AAAHAVLSNR VTIDHEAAAA LIQQWAGRRR
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