Gene Francci3_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0755 
Symbol 
ID3905823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp878720 
End bp879742 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content72% 
IMG OID637878088 
ProductRDD 
Protein accessionYP_479868 
Protein GI86739468 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.581888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG TCGTCACGGG AAAGGGATCC GCCGGTCTCG CCGGCACGGG TGTCCTCACG 
GGTGAGGCGA TCGTCACAGG TGAAGCGATC ACCATCGAAC TGCGGGTGGC TCGGCTGGGC
TCCCGTCTGA TCGCCGGCCT GCTCGACCTG CTCATCCAGC TCTACATCCT CTACGCGGTC
GGCGCCGCGG CCCTGCTGAT CGTGCGGCCC GACAACGACG CCCTGATCGC CGCGGTATTC
CTGCTGGTCT ACGTCGGCGT CGTGCTCGGG TATCCGGTCA CCTGCGAGAC GCTGACGCGC
GGGCGGACCC TCGGCAAGAT GGCCATGGGG CTGCGTGTCG TCCGCGACGA CGGAGGTCCC
ATCCACTTCC GGCACGCGTT CGCCCGGGGT CTGGTCGGGG CGGTCGTCGA ACGTCCCGGA
CTGCTACTGG GCCTGCCCGC GGTGATCAGC ATGCTGGTGT CGAAACACGC GAAGCGGCTG
GGGGACGTCT TCGCCGGCAC GGTCGTCCTG CAGGCCAGCG TGCCGCGCCC TGGCGGAGCG
CCGCCGTCCG TCCCGCCCCA GCTCGTCGGC TGGGCCGCCA CCCTCGACCT CACCGGGTTG
GATGATGCTC TGGCCCTGCG TGCCCGCCAG TTCCTCGGCC GGGCGCACGA GCTGTCCCCG
CAAGCCCTCG AACGCCTCGG CAGCGGGCTG GTCCGGCAGG TGCGGGCCGT CGTGACACCA
CCGCCGCCGC CCGGCACGCC GGGCTGGGCC TACCTGTCCG CCGTGTTGGC CGAGCGAACC
CGGCGTGCCT ACCATCGGCT GACGGCGAAC CGGCCGAGAT CGATACCCTC TCCCGTCTTC
TCCCCGTACC CGACGGCCCA GTACCCGACG GCCCAGTACC CGACGGCCCA GTACCCGACG
GCCCAGTACC CGACGGCCCA GTACCCGACG GCCCAGTACC CGACGGCCCA GTACCCGACG
GCCCAAGACC AATCCCCGCC ACCCCCCTAC CCCACGGCCC CGCAACCCCC GCCGGGCCGG
TAA
 
Protein sequence
MNQVVTGKGS AGLAGTGVLT GEAIVTGEAI TIELRVARLG SRLIAGLLDL LIQLYILYAV 
GAAALLIVRP DNDALIAAVF LLVYVGVVLG YPVTCETLTR GRTLGKMAMG LRVVRDDGGP
IHFRHAFARG LVGAVVERPG LLLGLPAVIS MLVSKHAKRL GDVFAGTVVL QASVPRPGGA
PPSVPPQLVG WAATLDLTGL DDALALRARQ FLGRAHELSP QALERLGSGL VRQVRAVVTP
PPPPGTPGWA YLSAVLAERT RRAYHRLTAN RPRSIPSPVF SPYPTAQYPT AQYPTAQYPT
AQYPTAQYPT AQYPTAQYPT AQDQSPPPPY PTAPQPPPGR