Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0712 |
Symbol | |
ID | 3903502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 815465 |
End bp | 817186 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878045 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_479825 |
Protein GI | 86739425 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG CGCCGCCGCG TCTGTCCGCG GGGTCCCAGG GCCCGCCCCC GCGGCGACGA AATCGTCTGA ATCCGACCGC CCGTGCGTAT CGAGGCCCGT CTCCGACCCG GGACGACCAC CAGGCACGCG ACGACCACCA GGCACGCGAC GACCACCAGG CACGCGACGA CCACCAGGCA CGCGACGACC ACCAGGCACG CGACGACCAC CAGGCACGCG ACGACCACCA GGCACGCGAC GACGAACACG ACACTCGCCG GGAGCGGTCT CTGACGTCCC GCCTGCTCAC GGTAGTCGCA GCGATGCTCG CCGCCGTGGT ACTCCTTGCC GCGGTGGGCG GCTGGACCGC CTACGAGTAT TTTGACGCCC AGATCAACCG GATCCGCCTC GGGCTCGGCG GGGACCGGCC GGCGGAGGCC GCGGAGGGCA CCCGGAACTT CCTGCTGGTC GGATCGGACA GCAGGGCGGG CACCGGCGGC GAGTACGAGA GCCAGGGAGC GGTGACCGAC GAACGGTCGG ACACGACGAT GCTGGCCCAC CTCGACGTGG ACGGGACCAC GACGATGGTC TCCTTTCCGA GGGACACCCT CGTGCGCATT CCGGGGCACG GCCTCGGCAA GCTGAACTCG GCGATCACCC TCGGCGGTCC CAGTCTCCTG ATCAGAACGA TCGAGAATCT CACCGACATC AAGATCGACC ACTACGTCTC GGTCGATCTG GCCGGTTTCA AGGAGATGAC CGACGCCATC GGCGGTGTCA CCGTCTGCGT AAAACCGCTA CCAAACGGCG GAAAGTCCAA TCTGTACGAT CCGTGGTCAC AGTGGCGGGG CACGGTAGGC AAGAATTATC TCAACGGAGA GCAGGCACTC GCCTTCGTCC GCCAACGCCA CGGCCTACCC GACAACGATT TTGATCGCAT CCGCCGTCAG CAGCAGTTCA TCGGCGCCGT CTTCACCCAG GCAACCACGA CCGGGGTGCT CGCCAACCCG GTCAGGCTGG AGAACCTGCT CCAGGCCGCG ACCAGGGCGC TCACCGTCGA TGACGGCACC AGCATGAACG ACATGCGCGC GCTCGCGACA CGGCTGCGCG GGATGTCCGC CGATCAGATC CGGTTCGAGA CGATCCCCGT ACACACCCCG ACGCCGGCCG AGGGCGGCAA CGCCGTGGGG GAGCTGCCGA GGTTCGGCTC CGTGCAGCTT TACGACCCCG AGACGCTGGA GAAGTTCCTC GCTCCGCTGC GCGGGCGGGC CCGTGACACG CGGGAGTCCT CCGTTACCCC GGCACCGACT CCGACGGTCG ACCCGGCGCA GGTGCTGATC GACGTCTACA ACGGCGCCGG AGTGGGGGGC CTCGCCGCCA AGGCCGCCGG GGCGCTGCGG CAGGCCGGTT TCCGGGTCGG CCCGCCGCAG ACGTGGCAGG CCGGCGTGGT GGAGACGACG CAGGTGCGCT ACCGCCCAAG CGAACAGGCC GCCGCCCATG CCGTGCAGGC CGACGTGCCC GGCAGCCGGT TGCGCGCGGA CGCCTCCGTC CCCGCCGGCC ACATCGCCCT CGTCCTGGGC ACGTCCTACA ACGGGGTGAA CCCGAGTCCA GCGGCCGGGG GCGCCGGATC GACCGGTGGT ACCGGCACAG CCGCCGGGGC GACCGGCGGG TCCGCTACGG CGGACCCGCC TCCCGCCTCA CCGTCAACGG CCGCGGATCT CACCTCGGGG TGCACGTACT AA
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Protein sequence | MTDAPPRLSA GSQGPPPRRR NRLNPTARAY RGPSPTRDDH QARDDHQARD DHQARDDHQA RDDHQARDDH QARDDHQARD DEHDTRRERS LTSRLLTVVA AMLAAVVLLA AVGGWTAYEY FDAQINRIRL GLGGDRPAEA AEGTRNFLLV GSDSRAGTGG EYESQGAVTD ERSDTTMLAH LDVDGTTTMV SFPRDTLVRI PGHGLGKLNS AITLGGPSLL IRTIENLTDI KIDHYVSVDL AGFKEMTDAI GGVTVCVKPL PNGGKSNLYD PWSQWRGTVG KNYLNGEQAL AFVRQRHGLP DNDFDRIRRQ QQFIGAVFTQ ATTTGVLANP VRLENLLQAA TRALTVDDGT SMNDMRALAT RLRGMSADQI RFETIPVHTP TPAEGGNAVG ELPRFGSVQL YDPETLEKFL APLRGRARDT RESSVTPAPT PTVDPAQVLI DVYNGAGVGG LAAKAAGALR QAGFRVGPPQ TWQAGVVETT QVRYRPSEQA AAHAVQADVP GSRLRADASV PAGHIALVLG TSYNGVNPSP AAGGAGSTGG TGTAAGATGG SATADPPPAS PSTAADLTSG CTY
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