Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0694 |
Symbol | |
ID | 3906244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 794611 |
End bp | 795855 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637878027 |
Product | peptidase M20D, amidohydrolase |
Protein accession | YP_479807 |
Protein GI | 86739407 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.887373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCAGGG AGGAGCCCGG CCGGCAGATG AAGGTTGACG AGACCGCGGC GGTCGCCGGG TGGGTGGCCG CGCACGAATC CGAGCTGATC GCGTTGCGTC GCGATCTCCA CGCTCACCCG GAGCTCGGCC GGCAGGAGCA CCGCACCGCC GAGCAGGTCG AGGCGCGGCT TCGGGCCGCG GGACTGTCGC CGCAGCGCCT GCCGGACCTT CCTGGCCTGT GGTGTGACAT CGGTGCCGGC GTCGATCATG ATCCAGGCGC TCCCGTGATC ATGCTGCGGG CCGACATGGA CGCTCTTCCG CTCTCGGATA TCAAGGACGT GCCGTACCGC TCCACCGTTC CGGGTGTGGC TCACGCCTGC GGACATGACG TACACACGAC CGTGGCGCTC GGCGCCGGAC TCGCGCTTGC CGAGGTCGCA CGCGTGTCCA CGCTGCCCGG GACCGTGCGC CTGGTGTTCC AGCCCGCGGA GGAGCTCATG CCGGGCGGCG CGTTGGACAT CATCGACGCG GGCGTGCTGA AGCCGGTGAC CACGGCGATC GCGCTGCACT GCGATCCGGC GCTCGACCTG GGCATGATCG GTCTGCGGAC GGGTCCGATC ACCTCTGCCG CCGATGCCGT CGAAATCACG CTGGCCGGGC CCGGCGGTCA CACCTCCCGG CCACAGAACA CAGTCGACCT GGTGTACGCG CTCGTCCGCC TTGCGGCCGA TCTCCCTGCC GCGTTGGGGC GACTGGTCGA TCCCAGGTCG GCGCTCTCCC TGGTCTGGGG TCAGGTGCAG GCGGGAACCG TTGCCAACGC CATCCCTCGT ACCGGTCAGC TTCGAGGCAC GGTCCGCACC CTGTCCCGGG AGACCTGGGA GAGCGTGCCG GCGCTGGTCA CTCAGGTTGC CGAGCAGCTC GTCGCACCGT ACGGAGCACA GATCGTGGTC GACTACCGCC GTGGCGTGCC GCCCGTGGTG AACAGCGTGG ATGTCGTCGA GGTCCTTCGG ACCGTCGTCG ACCGCGTGTT TGGTCATGGG GCCTCCACCA TGGTGGCGCA ATCGCTTGGT GGTGAGGACT TCGGTTGGTA TCTGAACCAC GTGCCGGGGG CCTTGGCCCG ATTGGGCACT CGGACACCCG GCGGCCACAC CTACGACCTT CACCAGGGCA GCTTCGACGT GGACGAGAGG GCGATCGGTG TGGGCGTGAA GCTGCTTGCC GGCGCGGCTC TCGATCTGCT GACCCATACG CCCCCGGCGC CGTGA
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Protein sequence | MCREEPGRQM KVDETAAVAG WVAAHESELI ALRRDLHAHP ELGRQEHRTA EQVEARLRAA GLSPQRLPDL PGLWCDIGAG VDHDPGAPVI MLRADMDALP LSDIKDVPYR STVPGVAHAC GHDVHTTVAL GAGLALAEVA RVSTLPGTVR LVFQPAEELM PGGALDIIDA GVLKPVTTAI ALHCDPALDL GMIGLRTGPI TSAADAVEIT LAGPGGHTSR PQNTVDLVYA LVRLAADLPA ALGRLVDPRS ALSLVWGQVQ AGTVANAIPR TGQLRGTVRT LSRETWESVP ALVTQVAEQL VAPYGAQIVV DYRRGVPPVV NSVDVVEVLR TVVDRVFGHG ASTMVAQSLG GEDFGWYLNH VPGALARLGT RTPGGHTYDL HQGSFDVDER AIGVGVKLLA GAALDLLTHT PPAP
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