Gene Francci3_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0673 
Symbol 
ID3905261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp769071 
End bp770267 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content64% 
IMG OID637878006 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_479786 
Protein GI86739386 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.974543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0892383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGGG ATCGGTTCGA GCGCAGCCCT ACTGGACATC TCGTCAAGAT CACTGGAACT 
GACGGGCGGT CGGGCGTCGC GTACGAACAT GTGGCCTTCC AGCCGGACCC GCTGGCGGGC
GCCGAGCCGG CGCTGGCGGG AGGGACGTGG CGGAACGTGG CCCGCGCGGG GCGCGCTCTC
GGTCGTCTCG ATCAGGCTGG TCGACAGATT CCTGAGCCCG CCTTGCTACT GCAACCCACG
CTTCGGACGG AGGCGCAGAG CACGTCCGCG TTGGAGGGGA CCTTCGCTCC CCTGGAGGAC
GTGCTTGCGG CTGAGGTCAC AGAGCCGACC TCGCAGAGCG AGGAGGTTCG GGAGGTCCTC
AACTATGTCC GGGCGGCGGA GGCGGCCTTC GCGTGGATAG GCGATGGTCG CCCACTCACC
GTAGCCGCGC TTTGTCAGGT GCATCGAGAT CTCGTGCGTG GAACTCCTGC GGACACCCGT
GATGCGGGGA GGATCCGCTC GATTCAGGTT GCGATCGGAA GCCGCGGTGG TGCGATCGAC
ACCGCTCGCT TCGTCCCGTC GCCGCCCGGA CTGGAACTGG ACGCGGCTGT ACGTGATCTG
CTGGACTGGA TCACCGTGGA TTCGAAGTCC ATTGACCCGG TCGTGGCTGC GGCGATGGCG
CACTATCAGT TCGAGACTCT TCATCCATTC AACGATGGAA ACGGCAGAAT CGGGCGGCTT
CTCGTGGTCC TCGATCTTTG TTGGAAGGGG ATACTCTCGG AGCCGTTGCT GGCTGTGTCG
CCCTGGTTCG AGGTGCGTCG GGAAGAGTAC CAGGACCATT TGAGGGAAGT TAGCGCAACG
GGAGACTGGG ACGGCTGGAT CTCGTTCTTC TCCGAAGGTC TGGTCGAGTC CTGTGAGCGG
ACTATTCGGA CAGTCGACGA CCTCCTCGGT CTCCAGGCCG AATACGTGCG ACGACTCAAG
GTGGCGGGTC TGACCGGTGG GTTGGTCCGC GATATCATCG ACGGGCTGAT CGGGAGTCCG
TTTGTCACGG TGCGTTCGGT CAGTGAAGAT ACCGGGAGGA CTTTGCAGGC GGCGAGCAAC
GCCGTCGCCA GGCTTGTGGA GCTGGAAATT CTGCGGGAAC GTACCGGGCG AAGCTATGGT
CGTGTCTTTG AGGCGGTGGA GGTCACCTCA GTGCTACGGG CCCAATCGGG CCGCTGA
 
Protein sequence
MDRDRFERSP TGHLVKITGT DGRSGVAYEH VAFQPDPLAG AEPALAGGTW RNVARAGRAL 
GRLDQAGRQI PEPALLLQPT LRTEAQSTSA LEGTFAPLED VLAAEVTEPT SQSEEVREVL
NYVRAAEAAF AWIGDGRPLT VAALCQVHRD LVRGTPADTR DAGRIRSIQV AIGSRGGAID
TARFVPSPPG LELDAAVRDL LDWITVDSKS IDPVVAAAMA HYQFETLHPF NDGNGRIGRL
LVVLDLCWKG ILSEPLLAVS PWFEVRREEY QDHLREVSAT GDWDGWISFF SEGLVESCER
TIRTVDDLLG LQAEYVRRLK VAGLTGGLVR DIIDGLIGSP FVTVRSVSED TGRTLQAASN
AVARLVELEI LRERTGRSYG RVFEAVEVTS VLRAQSGR