Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0660 |
Symbol | |
ID | 3902994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 755404 |
End bp | 756624 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637877993 |
Product | geranylgeranyl reductase |
Protein accession | YP_479773 |
Protein GI | 86739373 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0877902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGAGG CTGCCGACCT GCTCTCCCGT ACGATTGACG TCCTTGTCGT CGGGGGCGGC CCGGCCGGCA GCGCGGCGGC TCTGGGCGCC CTGCGGGAAC GCCCGGACGC ACACGTCGTC ATCGCCGACG CCGCCGAGTT CCCCCGGGAC AAGACCTGCG GTGACGGCAT CGCCCCACAC GGCCTGGACG TCCTGCGTGA TCTCGGCGTG ACCGATGCGG TCGCCGGGTA CCGGCCGGTG GACCGCATGC GCCTGCGCAC CCCAGGGGGC GCCGAGGTGG CCACTCCCTC AGCCCGAGCC AACTACGTGG TACCCAGGGA GGTCTTCGAC GCCCGTCTCG TGGCCGCCGC CCAGGCACGT GGAGCTCAGC TGATCCGGCG GCGCGTGCGG TCCCTGGAGT TTACCGACCG GCCGCGCCTG GACGGTCGGG GACGGGAGCC GGTCGTCGTG GTCAACGGCT CGCTCACGGC GCGGGTCGTC ATCGGCGCGG ACGGCGCAAA CTCCGCGGTA CGCCGCGGGC TAGGGCTGCC GGGTAACCCC CCCGGGGCAA TGGCGATCGC CGTGCGGGCC TATACCGAGG TCGCCTTCGG CGACGGCCCC CCCGAACAGT TCATCCACAT GACCGACGAG GGTTGGCCAG CCTACGCCTG GTCGTTCCCG ATCGGCGACG GCCGTGCGAA CATCGGCTAC GGGATGCTGC GGTCCCGGCT GGCCGGCGGG ACGGACGGAA CGAGTGCCAA GACCGTCCTG CGTCGCACGC TCGCCCGCAT GCTGCCCGAG ACACCGGCGC ACCCGGCCAC GCTGCGGGCC CATCATCTGC CGCTGTCGAC CCATCGCCCC CGGCAGCCGA ACGGTCCCGT GCTGCTCGCC GGGGATGCGG CCTCCCTGAT CAACCCCCTG ACCGGGGAGG GCATCTACTA CGCGGTGCTG TCGGGGTCGC TGGCCGGGCA TGCCGCCGTC CGCGCGGCGC ACCCGGCCGC CGCGGGCCGG GTCTACCGAC GCGCTCTCGA CGCGGAGCTG GGACGGCATC TGCGGCACAC GGCTCTGCTC GCCGGTCTCG CCGGGCGGCG CCGCACCCTG ATGGACGCGG CGGTCCGGGC CGCCCGCACC CGTACCGAGC TGTACGACAT GCTCGTCGAG ATCGGGCTGG GCCGCGGCAC CATCCCGACG AGTTCCCTGA CCCGTCTGGC GATGCGGCGC ACCATGACCG GCCTGCGCTA A
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Protein sequence | MDEAADLLSR TIDVLVVGGG PAGSAAALGA LRERPDAHVV IADAAEFPRD KTCGDGIAPH GLDVLRDLGV TDAVAGYRPV DRMRLRTPGG AEVATPSARA NYVVPREVFD ARLVAAAQAR GAQLIRRRVR SLEFTDRPRL DGRGREPVVV VNGSLTARVV IGADGANSAV RRGLGLPGNP PGAMAIAVRA YTEVAFGDGP PEQFIHMTDE GWPAYAWSFP IGDGRANIGY GMLRSRLAGG TDGTSAKTVL RRTLARMLPE TPAHPATLRA HHLPLSTHRP RQPNGPVLLA GDAASLINPL TGEGIYYAVL SGSLAGHAAV RAAHPAAAGR VYRRALDAEL GRHLRHTALL AGLAGRRRTL MDAAVRAART RTELYDMLVE IGLGRGTIPT SSLTRLAMRR TMTGLR
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