Gene Francci3_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0604 
Symbol 
ID3905887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp689840 
End bp690676 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID637877937 
Productmethionine aminopeptidase, type I 
Protein accessionYP_479717 
Protein GI86739317 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGAC GAGAGCACGT CCAGATCAAG ACGGCGGCAG AGATTGCCAA GATGCGGGTT 
GCTGGCCTGC TCGTCGCGAA GACGCTGGCG CGGCTGCGTG AGGCGGTCGT CCCCGGGGTC
ACCACGGCCG AGCTGGACGC CCTTGCCGAG AAGACGATCC GGGACGACGG CGGTATCCCG
TCCTTCAAGG GCTATGCCCA GCCGCCGTAT CCGGCCTCGA TCTGCAGCTC GGTCAACAAC
GAGGTAGTGC ACGCCATCCC CACCCGCAAG CGGGTGCTGC GCGAGGGCGA TATCATCTCG
ATCGACTGCG GGGCGATCGT GGACGGCTGG CACGGGGACG CCGCGATCAC CGTGCCGGTC
GGTGAGGTCG CCCCGGAGGT TCTCGCGATG ATCGACACGT GCGAGGGCGC GCTGTGGGCG
GGCCTCGCCG CAGCCCAGCT CGGCGGAAAG CTCACCGACA TCAGCGCCGC CGTCGAGCGG
CATGTCCGTC CACATGGCTA CGGGATCGTC GACCACTACG GCGGCCACGG CATCGGCAGC
GAGATGCACC AGCCCCCCCA CGTGCTCAAC CACGGCCGGC CTGGCCGTGG CATCCGGCTG
ATCGAGGGCC TTGCGCTGGC CATCGAGCCT ATGATCACTA TGGGGTCGCC GGACACGGCC
GTGCTCCCCG ACGACTGGAC CGTCGTGACC CGCGACGGCA GCCTCGCCGC CCACACCGAG
CACTCGGTGG CAATCACTCC CCGTGGGCCG TGGGTGCTAA CGGCGCCGGA CGGCGGAGCG
GCGAAACTCG CCGAGCTCGG GGTCGTCTGC GGGCAGCCGG CTGACGCCCC GTCCTGA
 
Protein sequence
MARREHVQIK TAAEIAKMRV AGLLVAKTLA RLREAVVPGV TTAELDALAE KTIRDDGGIP 
SFKGYAQPPY PASICSSVNN EVVHAIPTRK RVLREGDIIS IDCGAIVDGW HGDAAITVPV
GEVAPEVLAM IDTCEGALWA GLAAAQLGGK LTDISAAVER HVRPHGYGIV DHYGGHGIGS
EMHQPPHVLN HGRPGRGIRL IEGLALAIEP MITMGSPDTA VLPDDWTVVT RDGSLAAHTE
HSVAITPRGP WVLTAPDGGA AKLAELGVVC GQPADAPS