Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0600 |
Symbol | rpmD |
ID | 3905883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 686773 |
End bp | 686958 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637877933 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_479713 |
Protein GI | 86739313 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC TGCGCATCAC GCAGATCCGG TCGGGGATCG GTGGTACCTC GAACCAGCGG GCCACGCTGC GTACCCTTGG TCTGCGGAAG ATCAACGCGA CGACCGTCCG TGATGATCGT CCCGAGATTC GCGGGATGAT TAGAACTGTG ACCCATCTTG TCCGGGTCGA GGAGGTGGAC TCCTAG
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Protein sequence | MAKLRITQIR SGIGGTSNQR ATLRTLGLRK INATTVRDDR PEIRGMIRTV THLVRVEEVD S
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