| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0587 |
|---|
| Symbol | rplV |
|---|
| ID | 3905757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 680619 |
|---|
| End bp | 681044 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637877920 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_479700 |
|---|
| Protein GI | 86739300 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGACG ATCTCGTTGA CGGCCTGACC CGGGCCGGTC TTCCCGGGGC GAAGGCCTCG
GCCCGCTATG TCCGGGTCTC GCCGACGAAG GCCCGCCGGG TCGTCGACCT GGTGCGCGGG
CGCTCGGTCG GCGAGGCGCT GGACATCCTC CGGTTCGCTC CGCAGGCGGC CAGCGAGGAC
GTGTACAAGG TTGTCGCCAG CGCTGCGGCG AACGCCGAGA ACAACCACAG CCTCGATCCG
GCCACCCTGT GGGTCGGCGA GGTCTACGTG GACGAGGGGC CGACGCTCAA GCGCATCCGG
CCCCGAGCTC AGGGCCGGGC CTACCGGATC CGCAAGCGCA CCAGCCACAT CACCGTCGTG
GTGGAGAGCC GGGAGCCGGT CTCCGCGGCC GGCCGGGGCG CGAAGACGAC AAGGAGGGCC
CGGTAG
|
|---|
| Protein sequence | MADDLVDGLT RAGLPGAKAS ARYVRVSPTK ARRVVDLVRG RSVGEALDIL RFAPQAASED
VYKVVASAAA NAENNHSLDP ATLWVGEVYV DEGPTLKRIR PRAQGRAYRI RKRTSHITVV
VESREPVSAA GRGAKTTRRA R
|
|---|
| |