| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0579 |
|---|
| Symbol | |
|---|
| ID | 3905749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 673649 |
|---|
| End bp | 675745 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637877912 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_479692 |
|---|
| Protein GI | 86739292 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.179959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCTG ACGTACGTTC CTTGCTGGCC GGGACCCGCA ACATCGGGAT CATGGCCCAC
ATCGACGCGG GCAAGACCAC CACCACCGAG CGCATCCTCT TCTACACCGG TGTGAACTAC
AAGATCGGTG AGGTCCACGA GGGCGGCGCC ACGATGGACT GGATGGAGCA GGAGCAGGAG
CGGGGGATCA CCATCACCTC CGCGGCCACC ACCTGTCTCT GGCGCGACCA CACCATCAAC
ATCATCGATA CCCCCGGCCA TGTCGACTTC ACCGTCGAGG TGGAGCGCTC GCTGCGGGTC
CTTGACGGTG CGGTCGCGGT CTTCGACGCG GTCGCCGGAG TCGAGCCGCA GAGCGAGACG
GTCTGGAAGC AGGCCGACCG TTACAACGTC CCGCGTATCG CCTTCGTCAA CAAGATGGAC
CGGGTCGGTG CCGAGTTCCA CCGCTGCGTG GAGATGATGA TCGACCGGCT CGACGCGACG
CCGGCCGTGA TCCAGCTCCC GTGGGGCGTG GAGGCCGACT TCCGCGGTGT CATCGACCTG
GTCCGCATGA AGGGCCTCCT CTGGAAGACC GAGGACAAGG GCGCCTCTTA CGAGACCGTC
GACATCCCGC GGGATCACCT TGAGGCCGCG CAGGAGTGGC GCGACAAGCT CCTCGAGACC
GTCGCTGAGA ACGACGACGA GCTCATGGAG CTCTACCTCG AGGGTGAGGA GCCCTCCACG
GAGCAGCTCG TCGCAGCCCT GCGCCGCGCG ACCCTGGCGA GCAAGGTCAA CCCGGTGCTG
TGCGGTTCGG CGTTCAAGAA CAAGGGCGTC CAGCCCATGC TCGACGCCGT CGTCGACTTC
CTGCCGAACC CGCTGGACAT CGGCGCCACC GTCGGCCATG CGGTCGGTGA CGAGGAGACC
GAGGTCCGCC GGGAGCCGAG CGAGGACGAG CCGTTTTCCG CGCTCGCCTT CAAGATCATG
AGTGACCCGT ACGTGGGTAA GCTGACCTAC ATCCGGGTGT ACTCCGGCAA GCTGACTGGT
GGTTCGCCGG TGCTGAACTC GACGAAGGAC CGCAAGGAGC GTGTCGGCCG CATCCTGCAG
ATGCACGCCA ACCACCGGGA GGACCGGGAG GGCGTCGGCG CGGGACAGAT CGTGGCCGTG
GTGGGGCTGA AGAACACCAC CACGGGTGAC ACGCTCTGCG ACCCGAACGC CCCGGTGATC
CTGGAGTCGA TGACGTTCCC GGCGCCGGTC ATCCACGTCG CGATCGAGCC GAAGACCAAG
GCCGACCAGC AGAAGCTGGG CACCGCCATC CAGCGGCTCG CCGAGGAGGA CCCGACCTTC
CAGGTCCGCA CCGACGAGGA GACCGGTCAG ACGATCATCG CCGGCATGGG CGAGCTGCAC
TTGGATGTGC TGGTCGACCG GATGCGCCGC GAGTTCGGTG TCGAGGCGAA CGTCGGCAAG
CCGCAGGTGG CCTACCGGGA GACGATCCGC CGCAAGGTGG AGAAGGTCGA CTACACCCAC
AAGAAGCAGA CGGGTGGATC CGGCCAGTAC GCCCGGGTGA TCATCAACCT GGAGCCCTCC
GGCGGCGACG GCGGTGGCTA CGAGTTCGAG AACAAGGTCA CGGGTGGTCG CATCCCCCGG
GAGTACATCC CCTCGGTGGA TGCGGGCTGC CAGGAGGCCA TGGAGTTCGG CGTGCTCGCC
GGCTATCCGC TGGTGGACGT CAAGGTCACC CTGCTCGACG GCCAGTTCCA TGACGTCGAC
TCGTCCGAAC TCGCATTCAA GATCGCCGGT TCGATGGCGT TCAAGGACGC GGCCCGCAAG
GCCGACCCGG TGCTGCTCGA GCCCCTGATG GCCGTCGAGG TCACCACCCC CGAGGACCAC
ATGGGTGACG TGATCGGCGA CCTGAACTCC CGCCGTGGGC AGATCCAGGC GATGGAGGAG
CGGGGGGGCT CCCGGATCGT ACGGGCGCTG GTGCCACTGT CGGAGATGTT CGGCTACGTT
GGTGATCTTC GCTCGAAGAC CTCCGGCCGG GCGAGCTACT CCATGCAGTT CGACTCCTAC
GCCGAGGTTC CCGCGAACGT CGCCAAGGAG ATCATCGCCA AGGCCCGGGG AGAGTGA
|
|---|
| Protein sequence | MPSDVRSLLA GTRNIGIMAH IDAGKTTTTE RILFYTGVNY KIGEVHEGGA TMDWMEQEQE
RGITITSAAT TCLWRDHTIN IIDTPGHVDF TVEVERSLRV LDGAVAVFDA VAGVEPQSET
VWKQADRYNV PRIAFVNKMD RVGAEFHRCV EMMIDRLDAT PAVIQLPWGV EADFRGVIDL
VRMKGLLWKT EDKGASYETV DIPRDHLEAA QEWRDKLLET VAENDDELME LYLEGEEPST
EQLVAALRRA TLASKVNPVL CGSAFKNKGV QPMLDAVVDF LPNPLDIGAT VGHAVGDEET
EVRREPSEDE PFSALAFKIM SDPYVGKLTY IRVYSGKLTG GSPVLNSTKD RKERVGRILQ
MHANHREDRE GVGAGQIVAV VGLKNTTTGD TLCDPNAPVI LESMTFPAPV IHVAIEPKTK
ADQQKLGTAI QRLAEEDPTF QVRTDEETGQ TIIAGMGELH LDVLVDRMRR EFGVEANVGK
PQVAYRETIR RKVEKVDYTH KKQTGGSGQY ARVIINLEPS GGDGGGYEFE NKVTGGRIPR
EYIPSVDAGC QEAMEFGVLA GYPLVDVKVT LLDGQFHDVD SSELAFKIAG SMAFKDAARK
ADPVLLEPLM AVEVTTPEDH MGDVIGDLNS RRGQIQAMEE RGGSRIVRAL VPLSEMFGYV
GDLRSKTSGR ASYSMQFDSY AEVPANVAKE IIAKARGE
|
|---|
| |