Gene Francci3_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0578 
Symbol 
ID3905748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp673172 
End bp673642 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID637877911 
Product30S ribosomal protein S7 
Protein accessionYP_479691 
Protein GI86739291 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCA AGGGGCCTGC GCCCAAGCAC ACCGTGGTGG TCGACCCGGT GTACGGGTCG 
CCGCTGGTGA CCGCGCTGGT GAACAAGGTG CTGTTGAGCG GTAAGAAGTC GGTCGCGGAG
CGCATCGTGT ACGGCGCACT CGAGGGTGCG AAGAACAAGA CCGGCAACGA CCCGGTCGTC
ACGCTCAAGC GCGCGCTGGA CAACGTCAAG CCGACGCTGG AGGTGCGCAG CCGCCGGGTG
GGTGGTGCCA CCTACCAGGT TCCGGTCGAG GTTCGCGCCG GCCGGAGCAC TACCCTCGCG
CTGCGCTGGA TCGTCGGCTA CTCCCGGGCT CGTCGCGAGA AGACGATGAC CGAGCGGCTG
ATGAACGAGC TCATCGACGC AAGCAACGGC CTCGGCGCCA GCGTGAAGCG CCGGGAGGAC
ACCCACAAGA TGGCGGAGTC CAACAAGGCC TTCGCCCACT ACCGCTGGTG A
 
Protein sequence
MPRKGPAPKH TVVVDPVYGS PLVTALVNKV LLSGKKSVAE RIVYGALEGA KNKTGNDPVV 
TLKRALDNVK PTLEVRSRRV GGATYQVPVE VRAGRSTTLA LRWIVGYSRA RREKTMTERL
MNELIDASNG LGASVKRRED THKMAESNKA FAHYRW