Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0547 |
Symbol | |
ID | 3904198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 635047 |
End bp | 635850 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877876 |
Product | NADH dehydrogenase subunit J |
Protein accession | YP_479660 |
Protein GI | 86739260 |
COG category | [C] Energy production and conversion |
COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.424646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.443604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCACG AGATCCTCGC CGCGGCGGGG GACATCACCA GCACCTCCAC CGGTGAGGCC GCGACCTTCT GGATTCTCTC GCCGGTCGCG GTGCTGGCCG CACTCGGCAT GGTGATGGTC CGCAGCGCCG TGCACTCGGC GTTGCTGCTG GTGGCCAACC TGTTCTGCGT CGCGGTGTTC TACCTGATTC AGGAGGCACC GTTCCTCGGG TTTGTGCAGA TCATCGTCTA CGCGGGCGCG ATCATGGTGT TGTTCCTGTT CGTGCTGATG CTCGTCGGGG TCGACTCGTC CGACTCGTTG GTGGAGACCA TCCGTGGTCA GCGCCTCGGC GCGATCGTCT TCGGCCTCGG CTTCGCGGGC CTGCTGGCCT TCCCGATCGG TTCGGCGATC GACGGCGGGA GCGCCAAGGG CCTGTCCGAG GCGAACACCG GCGGCAACGT CCAGGCGATC GGCCGTCTGC TGTTCACCGA CTACGTCTTC GTCTTCGAGG CGATCTCGGC GCTGCTCGTC GTCGCCGCGA TCGGCACGAT GGTCCTCGGC CACCGGGAAC GTGAAGGCGG CCGGATCAGC CAGCGGGAGT GGATGCGGCG GCGCTTCACC GAGGGCCGTC AGGTCACCCC GTTGCCCGGG CCGGGCGTCT TCGCCCGGCA TGACTCCGCC GACACGCTAG GGCTGTTGCC GGGCGGCGGG CGCGCCTCGG GCATCGGGGG CGTCCCCGGG ACGCCCGACG AGCCGGGCGG CGGCATCTCC CGGGACGCGG ACGGCTCGGC GCCCGTCGGC GCCGGTAAGG GGGACGGTCG ATGA
|
Protein sequence | MNHEILAAAG DITSTSTGEA ATFWILSPVA VLAALGMVMV RSAVHSALLL VANLFCVAVF YLIQEAPFLG FVQIIVYAGA IMVLFLFVLM LVGVDSSDSL VETIRGQRLG AIVFGLGFAG LLAFPIGSAI DGGSAKGLSE ANTGGNVQAI GRLLFTDYVF VFEAISALLV VAAIGTMVLG HREREGGRIS QREWMRRRFT EGRQVTPLPG PGVFARHDSA DTLGLLPGGG RASGIGGVPG TPDEPGGGIS RDADGSAPVG AGKGDGR
|
| |