Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0484 |
Symbol | |
ID | 3903004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 565720 |
End bp | 566862 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877815 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_479599 |
Protein GI | 86739199 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGC CACGGCGTCG CCCGGCGGTG ATCCGGCGAC GTACACGTAG TGACACGGCT TCCAGGCGTT CCTCCGACGT TCCGGAGGCG ACGGTCGCGC GGCTTCCGCT CTACCTCCGG GTGCTGACGA CATTGGCGGA AAGCGGGGTT TATACTGTGT CTTCGGACAC GCTCGCGGCC GCCGCCGGAG TCACTCCGGC CAAGGTTCGC AAGGATCTGT CCCATCTCGG TTCCTACGGC ACGCGGGGCG TCGGCTACGA GGTGGATGTC CTGCTCGACT GCATCGCCGC GAAACTGGGC CTCACCGAGG ACAGAGCGGT TGTGCTGGTG GGAGTCGGCA ACCTCGGCCA CGCCCTGGCG GGTTACGGCG GCTTTTATGC CAGGGGCTTT CGGATCGTGG CCCTGGTCGA CGCGGATCCC GAGCGAGTCG GCGAGCGGGT CGGTGAGGTT GTCGTCAGTC CCGTCGGCGA TCTCGAACAG GTGATCGTCC AGGGTCAGGT CACGATCGGG ATGATCTGCA CGCCGGCAGC CGCGGCGCAG GGGGTGTGTG ATCGTCTGGT CGCTGCCGGG GTCACCAGCA TCCTCAACTT CGCCCCCACG GTGCTTTCGG TACCCGACGG TGTGGACGTG CGTAAAGTCG ACCTTGCCGT GGAACTGCAG ATCCTCTCGT TCCATGAAGC ACGTAAACGT CCGTCGCCGG CACGGGACAC ATCACCGAGA CGGGGCGCGA GATCCACACC GGGCGCCGGC TCCGGGCGTG ACGCCGTGCC GCCGCGCCGG GCGCGCCCGG CGCGGCGGGC GCCCTCGGCA CGCGAGGCGC TGCCAGGCGG CGACGAGGTC CTCGCCGCGC TCGGGGCGGC GGGCCTGGAC GGGGTGACGA GCGCGGACGG GACGGAGCCC TCCGCGGGCA GGCTGGAGAC CGATACGGAT GAGGTCGTGC GGGTGACTCG GCAAGTAGGC ATGACTCGTC CGGCGGGGGC AGCTCGTCCG GCCGGGATGG CTCGGGACGA TCGGCCGACC CGGGATGATC GGGAGGGGGA ACCGGGCGCG GTGCGCCTGG AGCACACCCC GGAGCCTGGA TCGCCGGCGC GCGGGACGCT GCCGGCCGCG GGAGCGCTGA TGGCCGGAGG TGAGGCGTCG TGA
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Protein sequence | MSQPRRRPAV IRRRTRSDTA SRRSSDVPEA TVARLPLYLR VLTTLAESGV YTVSSDTLAA AAGVTPAKVR KDLSHLGSYG TRGVGYEVDV LLDCIAAKLG LTEDRAVVLV GVGNLGHALA GYGGFYARGF RIVALVDADP ERVGERVGEV VVSPVGDLEQ VIVQGQVTIG MICTPAAAAQ GVCDRLVAAG VTSILNFAPT VLSVPDGVDV RKVDLAVELQ ILSFHEARKR PSPARDTSPR RGARSTPGAG SGRDAVPPRR ARPARRAPSA REALPGGDEV LAALGAAGLD GVTSADGTEP SAGRLETDTD EVVRVTRQVG MTRPAGAARP AGMARDDRPT RDDREGEPGA VRLEHTPEPG SPARGTLPAA GALMAGGEAS
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