| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0482 |
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| Symbol | |
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| ID | 3903002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 564244 |
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| End bp | 564960 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877813 |
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| Product | sigma-24 |
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| Protein accession | YP_479597 |
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| Protein GI | 86739197 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02952] RNA polymerase sigma-70 factor, TIGR02952 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAAT GCACGCTCGC CGACCTCGTC GACCTCGTCG ACCTCGCCGC CCCGCGCCGC
GGCCCCCTCC GCCGGCAGGA CGCGATGTCC CCGGTGGGCG CCCGGGAGGA CCGCGAGCGA
GTCGGGGACC CTCAGGGCGA TCCGGCCGAC GACGACCGGA CGGCGCTCGT CGCCCGGGCC
CGGCGAGGTG ACGTCAACGC CTTCGGGCTG CTCTACGACC GGTACGCCAA CCTCGTGTTC
CGGTACGCGC TGTACCGGCT GGGCGGGGAT CCGGTGGCCG CCGAGGACAT CGTCAGCGAG
ACCTTCCTGC GTGCCTTCCG CTCCATCGGC ACGTTCCAGT GGCAGGGACG GGACATCGGT
GCCTGGTTCA TCACCATCGC CCGCAACCTG CTGGTCGATC AGGCCCGCTC GGCGCGGCGC
CGGTTCGAGA TCCCGACGGC GGACATCCTC GCCGCGGCCG AGCACCGAGC CACGGCGCTG
ACGGCGCCGA GCCCCGAAGA GTCGATCCTG GCCGTGCTGA CCCGCCGCGA GCTGCTCGAC
GCCGTCCGCG AACTGCGCCC GGACCAGCAG GAGTGCGTCG CGCTCCGGTT CCTCGAAGGG
CTGTCGGTCC GCGAGACCGC GCTGGCCATG GGCCGCAACG AAGGGGCGGT CAAATCCTTG
CAGTTCAGAG CAATTCGGAC ACTTGCCCGC GCCCTTCCCG CAGCAGGCAC GGCCTGA
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| Protein sequence | MTECTLADLV DLVDLAAPRR GPLRRQDAMS PVGAREDRER VGDPQGDPAD DDRTALVARA
RRGDVNAFGL LYDRYANLVF RYALYRLGGD PVAAEDIVSE TFLRAFRSIG TFQWQGRDIG
AWFITIARNL LVDQARSARR RFEIPTADIL AAAEHRATAL TAPSPEESIL AVLTRRELLD
AVRELRPDQQ ECVALRFLEG LSVRETALAM GRNEGAVKSL QFRAIRTLAR ALPAAGTA
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