Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0449 |
Symbol | |
ID | 3903255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 529841 |
End bp | 530674 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637877780 |
Product | rhodanese-like protein |
Protein accession | YP_479564 |
Protein GI | 86739164 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.890664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTG AGAAGGCGCT GGTCGACGCC TCGTGGGTCG AAGCGAACCG TAACGACCCG AAGGTCGTCC TGGTCGAGGT CGACGAGGAC GTCTCCGCGT ACGACAAGGG GCACATCCCG GGGGCGGTGC GTCTCGACTG GAAGTCCGAG CTTCAGGACC CGGTCATTCG TGACTTCATC AACAGGGAGC AGTTCGAGAA GCTTCTCTCC GAGAAGGGGA TCTCGAACGA CGACATCGTC GTGCTCTACG GCGGGAACAA CAACTGGTTC GCCGCATACG CATACTGGTA CTTCAGCCTC TACGGCCACG CCGACGTCCG CCTGCTCGAC GGTGGTCGCA AGAAGTGGGA GCTCGACAGC CGTGAGCTGA CCACCGAGGC CACCCCGCGC CAGCCCACCA GCTACACCGC CCCGGAGCCG CGCACCGACA TCCGGGCCTT CCGTGAGGAG GTCATCTCCG CGATCGGTGA GAAGGCCCTG GTGGACGTCC GGTCGCCCGA CGAGTTCTCC GGCAGGCTGC TCGCTCCCGC GCACCTGCCG CAGGAGCAGT CCCAGCGGGC CGGGCACATC CCCACGGCGA AGAACATCCC GTGGGCGAAG ACCGCGAACG AGGACGGCAC GTTCAAGAGC AATGACGAGC TGACCGGCCT CTACACCGAG GCCGGGGTCG ACCTGTCCAG GGACATCATC GCCTACTGCC GTATCGGCGA GCGTTCGGCG CACACCTGGT TCGCGCTGCA CGAGTTGCTC GACCTGCCGA ACGTGAAAAA CTACGACGGT TCGTGGACCG AGTACGGCTC GCTCGTCGGC GTGCCGATCG AGAAGGGCGC GTGA
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Protein sequence | MSREKALVDA SWVEANRNDP KVVLVEVDED VSAYDKGHIP GAVRLDWKSE LQDPVIRDFI NREQFEKLLS EKGISNDDIV VLYGGNNNWF AAYAYWYFSL YGHADVRLLD GGRKKWELDS RELTTEATPR QPTSYTAPEP RTDIRAFREE VISAIGEKAL VDVRSPDEFS GRLLAPAHLP QEQSQRAGHI PTAKNIPWAK TANEDGTFKS NDELTGLYTE AGVDLSRDII AYCRIGERSA HTWFALHELL DLPNVKNYDG SWTEYGSLVG VPIEKGA
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