Gene Francci3_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0449 
Symbol 
ID3903255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp529841 
End bp530674 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID637877780 
Productrhodanese-like protein 
Protein accessionYP_479564 
Protein GI86739164 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.890664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG AGAAGGCGCT GGTCGACGCC TCGTGGGTCG AAGCGAACCG TAACGACCCG 
AAGGTCGTCC TGGTCGAGGT CGACGAGGAC GTCTCCGCGT ACGACAAGGG GCACATCCCG
GGGGCGGTGC GTCTCGACTG GAAGTCCGAG CTTCAGGACC CGGTCATTCG TGACTTCATC
AACAGGGAGC AGTTCGAGAA GCTTCTCTCC GAGAAGGGGA TCTCGAACGA CGACATCGTC
GTGCTCTACG GCGGGAACAA CAACTGGTTC GCCGCATACG CATACTGGTA CTTCAGCCTC
TACGGCCACG CCGACGTCCG CCTGCTCGAC GGTGGTCGCA AGAAGTGGGA GCTCGACAGC
CGTGAGCTGA CCACCGAGGC CACCCCGCGC CAGCCCACCA GCTACACCGC CCCGGAGCCG
CGCACCGACA TCCGGGCCTT CCGTGAGGAG GTCATCTCCG CGATCGGTGA GAAGGCCCTG
GTGGACGTCC GGTCGCCCGA CGAGTTCTCC GGCAGGCTGC TCGCTCCCGC GCACCTGCCG
CAGGAGCAGT CCCAGCGGGC CGGGCACATC CCCACGGCGA AGAACATCCC GTGGGCGAAG
ACCGCGAACG AGGACGGCAC GTTCAAGAGC AATGACGAGC TGACCGGCCT CTACACCGAG
GCCGGGGTCG ACCTGTCCAG GGACATCATC GCCTACTGCC GTATCGGCGA GCGTTCGGCG
CACACCTGGT TCGCGCTGCA CGAGTTGCTC GACCTGCCGA ACGTGAAAAA CTACGACGGT
TCGTGGACCG AGTACGGCTC GCTCGTCGGC GTGCCGATCG AGAAGGGCGC GTGA
 
Protein sequence
MSREKALVDA SWVEANRNDP KVVLVEVDED VSAYDKGHIP GAVRLDWKSE LQDPVIRDFI 
NREQFEKLLS EKGISNDDIV VLYGGNNNWF AAYAYWYFSL YGHADVRLLD GGRKKWELDS
RELTTEATPR QPTSYTAPEP RTDIRAFREE VISAIGEKAL VDVRSPDEFS GRLLAPAHLP
QEQSQRAGHI PTAKNIPWAK TANEDGTFKS NDELTGLYTE AGVDLSRDII AYCRIGERSA
HTWFALHELL DLPNVKNYDG SWTEYGSLVG VPIEKGA