Gene Francci3_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0435 
Symbol 
ID3903624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp517764 
End bp518216 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID637877767 
ProductMarR family transcriptional regulator 
Protein accessionYP_479551 
Protein GI86739151 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTCAG ACGACGGCGC GAGGCTCGCG ACAGCGCTCG GACTTCTCCT GACCCGGCCG 
AACCGGACGC GTCTGTTCGG GGAGTTGCTC TCCTCGGCGG ACGTCGGACT CGACGAGGCT
GTCTACCCCG TGCTCAACGG TCTGGCCCGT ACGGGCCCGA CCACGGCGCG CAAGCTGAGC
ATGGAGATCG GCATCGACCG TTCGGTGGTG AGCCGGCACA GTGATCGTCT CGAGGCGCTC
GGGTTGCTGC GCCGTTCGGC CGATCCCGAT GACGCCCGCG CGGTCCGCCT GACGCTCACC
GACGAGGGCC GGGCCGCCAT CGATCGCTCT CGGCGTCGGC TGGCCGACGT CTTCCAGCGC
ATGCTCGACG ACTGGCCCGC CGAGGACGCG CGTGCCTTCG TCGCCGGCAT GGAACGCTTT
GTCGCGGAGC ATCTTGCCGG TCGGGACCGG TGA
 
Protein sequence
MGSDDGARLA TALGLLLTRP NRTRLFGELL SSADVGLDEA VYPVLNGLAR TGPTTARKLS 
MEIGIDRSVV SRHSDRLEAL GLLRRSADPD DARAVRLTLT DEGRAAIDRS RRRLADVFQR
MLDDWPAEDA RAFVAGMERF VAEHLAGRDR