Gene Francci3_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0390 
Symbol 
ID3903632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp461148 
End bp461462 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content64% 
IMG OID637877719 
ProductXRE family transcriptional regulator 
Protein accessionYP_479506 
Protein GI86739106 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TCCATGACTG GGAGGACATC CGCGCCGAGC TCCATGACGG CGATGACGCG 
GCACTCGCCG TGGAACGAGC GCGTACGGAG GCGTGGGCCA GCGCCTACCA CCTGGCCGAG
GAGCGCAAGC GCCTTGGTTT GACACAGCGT CAGGTCGCCG ATCTGATGGG CGTCTCACCT
GGCCGGATAA GCCAGATCGA AAACGGTGAT CTGGACGTGA ACGAGGTGGC AACCCTGAGC
CGATACGCCC GGGCGTTGGG CGCACGCATG CGGATCATCT TCGACTACGG TAATGACCTC
CGCCAGATCG CCTGA
 
Protein sequence
MTEFHDWEDI RAELHDGDDA ALAVERARTE AWASAYHLAE ERKRLGLTQR QVADLMGVSP 
GRISQIENGD LDVNEVATLS RYARALGARM RIIFDYGNDL RQIA