Gene Francci3_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0330 
Symbol 
ID3903362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp386624 
End bp387049 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID637877659 
ProductMarR family transcriptional regulator 
Protein accessionYP_479446 
Protein GI86739046 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGACC TGTCCAGCCA TCCCGGCCAG CTGGCCCGCC GGCTCCAGCA GGTGACCTAT 
CAGCTCTGGA CCACCACTGT CTCGACCGAG ACGACACCTC CGCAGTTCGT GGTCCTCAAC
AGCCTGCTCG CTGATCCCGA TATTGATCAG CGCACGCTCG GAGAACGAGC CTCCCTGGAT
CGGTCGACGG TGGCCGATGT GGTGGCGAGG CTCGTGCAGC GTGGGCTCAT CCGCCGGGTC
CGTGACCCGC GTGATGGCCG GCGCAACGTC CTGCGGCTGA CCAAGCGGGG AGAGTCGACC
CACGGTCAGG TGGCGGACCG CATCGACCAG ATGAACGACA AGCTGCTGGC GCCGCTGTCC
GAGGAGGAAC AGACCGCCCT GTTGTCGATG TTGGCCCGCA TCGTCGACCA GGATAGGCCC
CATTAA
 
Protein sequence
MVDLSSHPGQ LARRLQQVTY QLWTTTVSTE TTPPQFVVLN SLLADPDIDQ RTLGERASLD 
RSTVADVVAR LVQRGLIRRV RDPRDGRRNV LRLTKRGEST HGQVADRIDQ MNDKLLAPLS
EEEQTALLSM LARIVDQDRP H