| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0322 |
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| Symbol | |
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| ID | 3903354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 377113 |
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| End bp | 379731 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877651 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_479438 |
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| Protein GI | 86739038 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only |
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| COG ID | [COG0443] Molecular chaperone
[COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACGGG TTCGGGCCGG ATCGTCGGGG GGAGCGAGAT GGCTTGGTGC CGAATCGGGG
GCGCACCGGC GTGATTCCGC GGACTGTCGG TCGTCGGGGA AGGTCGGCAG TCCGCCTGTT
CATACCGGCA AGCGCCGGCC GCCGCTGTCC GCACCGGTGA AAGCCGCCAC GGGGGGCAAC
CGGTCACAAA CATTCGGTCC CGGCGTTCGC CCCACTGATG AGGGTGTCGC TGGTGGCTTT
GTCGACATCG CTACGATCTG CCCACTGGAA ACGTGGACAG GGGGTGCTGT GGGCGAGCCG
ATCCTCGCCA TCGACTACGG CACCTGCAGT GCCTCGGCCG CCTTGGCCGT CGACGGTCGC
ATCGAACCGG TGAAGGAGCC CGCGAGCGGC TCGGCGAGCT GGCCCGCGTC GGTCTTCGTG
GATGGCGGCA GCCTGATCGT CGGCACGCTC GCCGAGCGGC GCAAGCGGAT CTGGCCCGCG
GCGTACCGCG GCGAGGTCAA GCGCGATCTG GCCCGGGACA GCGCCGTGTC ACTCGACGGC
CGCAGCTATC CGGCGCACGT GCTGGTGACC GCGGTGCTGT CCGCGCTGAA GGCCGAGGCC
GAACAGCAGC TCGGTGGTGC GGCGCTGTCG CGGGCCGTCG TCACGATACC GGCGAGCTAC
GATCCCGCCG GCCCGCTGCG CCGGACGATG ATCGCCGCAG CGGAGGCCGC CGGGTTCGTC
GACGTGGACC TGCTCGCCGA GCCGGTCGCG GCGGCCTGGT CGCCGGTGGT CGGCGTCGCG
CCCGAGCCCG GCTCGCTCAT GCTCGTGTAC GACCTGGGCG GCGGGACGTT CGAGGGGGCG
CTGGTCGCGG TCGGTGAGGA CGGCCGGCAC GAGATGCTCT CCCACTCGGC TCTGCACGAC
TGCGGCGGCC GCGAACTCGA CCAGATTCTG TTCGACGAGA TCCTGGGGTT GTACGGGCCG
GGGCTGGAAC CGCTACTGAA TCCGCCCGGG ATCGGCGAGA CGTTCCAGAC CACGGCCAAC
CGGACCCGCC ACGAGCTGCT CGACTTCGCC CGGGCAGTGA AACATCAACT CTCCGACATC
GCCGTGGTGG AGGATGTTTT CAGCCCGGCC GGCCTGCTGG TCAGCATGCA GCGTGACCGG
TTCGCCCAGC TCGCCTCCCC CATCCTGGCC CGCACGATGG CCTGCTGCCA GCACTTGCTG
AAGTCCTCCG GTTACGGACC GGACAAGCTG AGTGGGGTGC TCCTCGTCGG TGGCAGCTCC
CGGATCCCGG TCGTCACCGA CATCCTCGAA GGTCGGCTCG GGGTCGGCAC CGACTGGCCG
GGGCAGCAGA TCTACCTCCC CGCCGATCCC GAGCTCGCCG TGGTGCTCGG CGCCGCCGCC
TGGGCAAGCT CGGTCTCCAC CCGCCGGACC ACCGCGGCGC GCCCGAATCC GGTCCTGCAA
CCGGCTCGCT GGGACATCCC CGGCGGGCGG GCGACGATGG TGCGCTGGCT CGTCGAGCCC
GGGGAGCGCT TCGACGCGAG CGCCGTGCTG GCGCGGGTCC GCCTCACCGA CGGTTCCCTG
TTCGACCTGG CCGCCGAGGC GCCGGGTAGC CTCATCCACA CCCACGCGGC ACCCGGCACT
CCGGTCCGCG ACGCCGACTG GTTGGCGACC ACACTTCCGT CCGGGCCGGT GCCGATGGGG
TCGGCGGTGC CGGCGGACCT GCGCGGCTTC GAGCGCAGCA GCCGCCCGTC CCACCACGTC
GAGGTCACCG CGCGGGCCAC CCTCAAGGGA CACGAACGCG ACGTCACCTC GGCGGCCTTC
TCCCCGGACG GCAAGCTGCT CGCCACCACC AGCAAGGACG GCACCCGGCT GTGGGACGTC
GCCACCGGCC GAACGTCGGT CACACTCAGC GGACGCAAGA GCCTGGTCGT GCACGGCTGC
GCCTTTTCCT CGGACGGCAA GCTGCTCGCC ACCACCGGCA GCGACAAGAC GGCCCGCATC
TGGGACGTTG ACGCCGCCCG CCAGACGGTG ACCCTGACCG GGCACCGGGG ACCCGTGTAC
GGCTGCGCCT TCTCCCCGGA CGGCAGCCTG CTCGCCACGA CCAGTACCGA CCGCACCGTC
CGGCTGTGGG GTTCGTCGAC CGGGAAAAAC CTTGCCACCC TCAACGGCCA TCGCGGCTCG
GTCTACGGCT GCGCCTTCTC CCCCGACGGC CGGCTGCTGG TCACCGCCGG CGCGGAGTCC
ACCCTGCTGT GGAACGTCAC GGTTGGCGAG ATCATCATGA GCCTGCCGGG GCACACGAAC
TTCGCCGGCG GATGCGCCTT CTCCCCCGAC GGCCGGCTGC TCGCGACGAG CGGCAACGAG
GGCACCCGGC TCACCGACGC CTCCAGCGGC ACCACCGTGC TCACTCTGCC GGGTTCGGCG
CAGAGCTGCG CCTTCTCCCC GGACGGCCAC CTGCTGGCGA CGGCGAGCAC CGACGACACC
GCGCAACTGT GGGACGTCGC GACCGGGTCC GCGATCGCCA CCCTCACCGG GCACAGCAGC
ACGGTGATGA GCTGCGCGTT CGCCCCCTAC GGCCTCCTGC TCGCCACCAC CAGTACCGAC
ATGACCGCTC GGCTCTGGGA CATCATCTAC ACCCCCTGA
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| Protein sequence | MRRVRAGSSG GARWLGAESG AHRRDSADCR SSGKVGSPPV HTGKRRPPLS APVKAATGGN
RSQTFGPGVR PTDEGVAGGF VDIATICPLE TWTGGAVGEP ILAIDYGTCS ASAALAVDGR
IEPVKEPASG SASWPASVFV DGGSLIVGTL AERRKRIWPA AYRGEVKRDL ARDSAVSLDG
RSYPAHVLVT AVLSALKAEA EQQLGGAALS RAVVTIPASY DPAGPLRRTM IAAAEAAGFV
DVDLLAEPVA AAWSPVVGVA PEPGSLMLVY DLGGGTFEGA LVAVGEDGRH EMLSHSALHD
CGGRELDQIL FDEILGLYGP GLEPLLNPPG IGETFQTTAN RTRHELLDFA RAVKHQLSDI
AVVEDVFSPA GLLVSMQRDR FAQLASPILA RTMACCQHLL KSSGYGPDKL SGVLLVGGSS
RIPVVTDILE GRLGVGTDWP GQQIYLPADP ELAVVLGAAA WASSVSTRRT TAARPNPVLQ
PARWDIPGGR ATMVRWLVEP GERFDASAVL ARVRLTDGSL FDLAAEAPGS LIHTHAAPGT
PVRDADWLAT TLPSGPVPMG SAVPADLRGF ERSSRPSHHV EVTARATLKG HERDVTSAAF
SPDGKLLATT SKDGTRLWDV ATGRTSVTLS GRKSLVVHGC AFSSDGKLLA TTGSDKTARI
WDVDAARQTV TLTGHRGPVY GCAFSPDGSL LATTSTDRTV RLWGSSTGKN LATLNGHRGS
VYGCAFSPDG RLLVTAGAES TLLWNVTVGE IIMSLPGHTN FAGGCAFSPD GRLLATSGNE
GTRLTDASSG TTVLTLPGSA QSCAFSPDGH LLATASTDDT AQLWDVATGS AIATLTGHSS
TVMSCAFAPY GLLLATTSTD MTARLWDIIY TP
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