| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0287 |
|---|
| Symbol | |
|---|
| ID | 3903031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 332611 |
|---|
| End bp | 333921 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637877616 |
|---|
| Product | magnesium and cobalt transport protein CorA |
|---|
| Protein accession | YP_479403 |
|---|
| Protein GI | 86739003 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.523176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.774272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAG GTGGACCTGG ACATGGATCG GCGGCAGGGA AGAAGGCAGT GATGCGGGAC
GACGCGGTGC CGGGCGAAAG GGTACGCGAC GAGACGGTAC GCGAGACCCG GGGACGCGAC
GTTGATGGCG CGCGCCCGGA CGGCGGCGAC CACGGCAGCC AGCATCCCGT TCGGGAGGTG
CTGGGGGACG CCCTGGAGCA GGCGTCGGCC AACGCCCATA AGCTCGCCGG CGCGCTGACC
CGTCCGGTCT CCCTGGTCCG GGTGGGTCGC AAACGACGCG GGGCGCCCCG CTCCGAGCTA
CCGCGGACAC CGGACGGGCG CGTCATGGCC TGCGGCGTGT ACAGCCATGG CCGGCGGGTC
ACCATGGACA TCGACCAGGC CGACGCGCTG CGGTTGGCGC GGTCCGAACG CAACGGGTTC
GCCTGGCTCG GCCTGTTCGA GCCGAGCTAC GAGCAGCTCA CCGCGATCGC CGAGGAGTAC
AGGCTGGACA AGCTCGCGGT GGAGGACGCG GTCACCGGCC ACCAGCGCCC CAAGCTCGAG
CAATACGAGA ACCACCTGTT CATGGTGCTC AAGACGACCA GTTACGTGGA GCACACCCAG
GTAACGGGCA CCTCCGAGGT AGTCACCACC GGCGAAATCA TGATCTTCCT CGGCGAGGAC
TTCGTCGTGA CCGTGCGGCA CGGCAGGCAC GGGGAGATGA CGAAGCTGCG CGGCCGGCTG
GAGGCCAACC CGGAGATGCT CCGGCACGGC CCGACGGCCG TGCTGCACGC CATCTGCGAC
AGCATTGTGG ACGACTACGT CCGCACCGTG GAAAGCATCC AGGCCGACGT CGACCAGATC
GAGACGGGCG TCTTCCATCG GGATCAGAAG CCGTCGACGG AAAGCGCCTA CCAGATGAAA
CGCGAGCTTC TGGAGCTCAA GCACGCGGTG CTGCCGCTCG CGGGCCCGTT GCGTACCCTC
ACCATGGACG CCCCCACGAT GGTCGACGTG GCGATGCGCC GTTACTTCCG GGACGTCGCC
GACCACCTCG AGCAGGTCAG CGAGCGAATA GCTCACTTCG ACGAGCTGCT TTCCTCCGTG
CTCCAGGCGA CGCTGACGCA GGTGACGATC GCGCAGAACG AGGACATGCG ACGGATCAGT
GCCTGGGTGG CGATCGGCGC CGTCCCGACC GCCGTCGCCG GGATCTACGG CATGAACTTC
GACCACATGC CGGAGCTTCG TCAGACGTGG GGCTACCCGG CCGTCCTGGC CGTCATTACG
ACGATCTGTC TGTTTCTCTA CCGTGCGTTC AAGCGCAACG GCTGGCTCTG A
|
|---|
| Protein sequence | MPTGGPGHGS AAGKKAVMRD DAVPGERVRD ETVRETRGRD VDGARPDGGD HGSQHPVREV
LGDALEQASA NAHKLAGALT RPVSLVRVGR KRRGAPRSEL PRTPDGRVMA CGVYSHGRRV
TMDIDQADAL RLARSERNGF AWLGLFEPSY EQLTAIAEEY RLDKLAVEDA VTGHQRPKLE
QYENHLFMVL KTTSYVEHTQ VTGTSEVVTT GEIMIFLGED FVVTVRHGRH GEMTKLRGRL
EANPEMLRHG PTAVLHAICD SIVDDYVRTV ESIQADVDQI ETGVFHRDQK PSTESAYQMK
RELLELKHAV LPLAGPLRTL TMDAPTMVDV AMRRYFRDVA DHLEQVSERI AHFDELLSSV
LQATLTQVTI AQNEDMRRIS AWVAIGAVPT AVAGIYGMNF DHMPELRQTW GYPAVLAVIT
TICLFLYRAF KRNGWL
|
|---|
| |