Gene Francci3_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0249 
Symbol 
ID3903657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp287447 
End bp288355 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID637877577 
ProductABC transporter related 
Protein accessionYP_479366 
Protein GI86738966 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GGCTTCGACG GAACCTGAGC ACCGACACCG ACACCAACAC CACGGCGGCG 
GCCACGGCCG TCGCCACCCT GGAGCGCCCG GCCACCGCCG ACGCTCAGCA CACCGCCGAC
GCTCAGCACA CCGCCGACGC TCAGCACACC GCCGACGCTC AGCACACCGC CGAAACCGCC
GAAACCCGCG GTGCCGACGG CGCCGCCATC CGGATCCGCG GCCTGCGTCG CACCTTCGGG
AATCACACGG TCCTCGACGG CCTCGACCTC ACGGTCGCCT CCGGGGAGTT CGTCGCCCTG
CTGGGCCGCA GCGGGTCAGG GAAGAGCACG CTGATCCGCA TCCTCGGCGG CTTCGACGGC
GGCATCTCCG GCGAGGTTCT GGCCACCCGG CAGCGTTCGG TCGTCTTCCA GGAGGCCCGG
CTGCTTCCAT GGACGCGGAC CCTGGCCAAC GTGACGATCG GTCTGTCCGG CCGCGACGTC
GCCGAACGCG GACGGGTGGC GCTCGCAGAG GTCGGGCTGG CCGGGCGGGA ACGGTCCTGG
CCGGTGGCGC TGTCCGGCGG TGAGGCACAG CGGGTCGCGC TCGCCCGGGC GCTGGTTCGG
GAGCCGGACC TTGTCATGCT CGACGAACCG TTCGGGGCCC TCGACGCCCT GACCCGGATC
AGGATGCACG CCCTGCTCCA GCAGCTGTGC CGTCGCCACC GGCCGGCGGT ACTGTTCGTC
ACGCACGACG TTGACGAGGC GATCCTGCTC GCGGACCGGG TGCTTGTCCT CACCGAGGGA
CGGCTCTCCC TCGACGTTCC AGTCGATGTG GCGTCCCCTC GGCGACGGAC CGACCCCGCC
TTCGACCGGC TGCGTTCCAC GCTGCTGGCC GAGCTCGGCG TCGACGAACT CGCCGAAGGC
GATCATTGA
 
Protein sequence
MAPRLRRNLS TDTDTNTTAA ATAVATLERP ATADAQHTAD AQHTADAQHT ADAQHTAETA 
ETRGADGAAI RIRGLRRTFG NHTVLDGLDL TVASGEFVAL LGRSGSGKST LIRILGGFDG
GISGEVLATR QRSVVFQEAR LLPWTRTLAN VTIGLSGRDV AERGRVALAE VGLAGRERSW
PVALSGGEAQ RVALARALVR EPDLVMLDEP FGALDALTRI RMHALLQQLC RRHRPAVLFV
THDVDEAILL ADRVLVLTEG RLSLDVPVDV ASPRRRTDPA FDRLRSTLLA ELGVDELAEG
DH