Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0249 |
Symbol | |
ID | 3903657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 287447 |
End bp | 288355 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877577 |
Product | ABC transporter related |
Protein accession | YP_479366 |
Protein GI | 86738966 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCGC GGCTTCGACG GAACCTGAGC ACCGACACCG ACACCAACAC CACGGCGGCG GCCACGGCCG TCGCCACCCT GGAGCGCCCG GCCACCGCCG ACGCTCAGCA CACCGCCGAC GCTCAGCACA CCGCCGACGC TCAGCACACC GCCGACGCTC AGCACACCGC CGAAACCGCC GAAACCCGCG GTGCCGACGG CGCCGCCATC CGGATCCGCG GCCTGCGTCG CACCTTCGGG AATCACACGG TCCTCGACGG CCTCGACCTC ACGGTCGCCT CCGGGGAGTT CGTCGCCCTG CTGGGCCGCA GCGGGTCAGG GAAGAGCACG CTGATCCGCA TCCTCGGCGG CTTCGACGGC GGCATCTCCG GCGAGGTTCT GGCCACCCGG CAGCGTTCGG TCGTCTTCCA GGAGGCCCGG CTGCTTCCAT GGACGCGGAC CCTGGCCAAC GTGACGATCG GTCTGTCCGG CCGCGACGTC GCCGAACGCG GACGGGTGGC GCTCGCAGAG GTCGGGCTGG CCGGGCGGGA ACGGTCCTGG CCGGTGGCGC TGTCCGGCGG TGAGGCACAG CGGGTCGCGC TCGCCCGGGC GCTGGTTCGG GAGCCGGACC TTGTCATGCT CGACGAACCG TTCGGGGCCC TCGACGCCCT GACCCGGATC AGGATGCACG CCCTGCTCCA GCAGCTGTGC CGTCGCCACC GGCCGGCGGT ACTGTTCGTC ACGCACGACG TTGACGAGGC GATCCTGCTC GCGGACCGGG TGCTTGTCCT CACCGAGGGA CGGCTCTCCC TCGACGTTCC AGTCGATGTG GCGTCCCCTC GGCGACGGAC CGACCCCGCC TTCGACCGGC TGCGTTCCAC GCTGCTGGCC GAGCTCGGCG TCGACGAACT CGCCGAAGGC GATCATTGA
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Protein sequence | MAPRLRRNLS TDTDTNTTAA ATAVATLERP ATADAQHTAD AQHTADAQHT ADAQHTAETA ETRGADGAAI RIRGLRRTFG NHTVLDGLDL TVASGEFVAL LGRSGSGKST LIRILGGFDG GISGEVLATR QRSVVFQEAR LLPWTRTLAN VTIGLSGRDV AERGRVALAE VGLAGRERSW PVALSGGEAQ RVALARALVR EPDLVMLDEP FGALDALTRI RMHALLQQLC RRHRPAVLFV THDVDEAILL ADRVLVLTEG RLSLDVPVDV ASPRRRTDPA FDRLRSTLLA ELGVDELAEG DH
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