Gene Francci3_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0127 
Symbol 
ID3903457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp157063 
End bp157398 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content66% 
IMG OID637877460 
ProductXRE family transcriptional regulator 
Protein accessionYP_479250 
Protein GI86738850 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCG AGCCCGCCTA CCAGGAGTTC GGAGAGCGGC TAGCCCAGAC ACGTCGACAT 
GCTTCGCTGA CCCAGCGCGA CGTCGCCGAG CGTTCAGGTA TCAGCCGCCC GACTATCGCC
AACATTGAGA AGGGGCGGCA GCGCCTGCTC TACCATCAGC TCCTCGACTT GGCGCACGCG
ATCGGGGTCG ATCCACGCGA CCTCCTGCCC GCCCCGCCGA CACCGTCGCC GGCTCTCGCG
CACCTCGATG ACCTGGCGCC ACCTGCTCAT GTGCTTGACT GGGTCCGTCG GGGCGTAGAT
AGAACAGGCA GACAGGACCG TGGCGAGCAA CGCTGA
 
Protein sequence
MTIEPAYQEF GERLAQTRRH ASLTQRDVAE RSGISRPTIA NIEKGRQRLL YHQLLDLAHA 
IGVDPRDLLP APPTPSPALA HLDDLAPPAH VLDWVRRGVD RTGRQDRGEQ R