Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0082 |
Symbol | |
ID | 3905126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 100068 |
End bp | 101192 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877412 |
Product | phosphoserine aminotransferase |
Protein accession | YP_479205 |
Protein GI | 86738805 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGACG CTCCCGCGAT CGTGCTGCCC GACCGGCTGC GTCCCCGGGA CGGCCGGTTC GGCTGTGGCC CGTCGAAGAT CCGTCCCGAG GCGGTCGAGG CCCTCGCCAC GAGCGGGGCG ACCTACCTCG GCACCTCACA CCGGCAGAAG CCGGTCAAGA GCCTGGTCGG CCGGGTGCGG GCAGGCCTGT CCGAGCTGTT CTCCCTGCCC GAGGGCTACG AGGTCGTGCT CGGGATCGGC GGCGCCACCG CCTTCTGGGA CGCGGCAGCC TTCAACCTCG TCCGGACCCG CTCCCAGCAC CTCGTCTTCG GCGAGTTCGG GGGCAAGTTC GCCGACACGA CGAAGGGCGC GCCGTTCCTG GCCGCGCCGT CGGTGATCTC CTCGCCGCCC GGTACGCATC CGGACTGGGC GCCGGAGGCG GGCATCGACG TCTACGCCAC TCCGCACAAC GAGACCTCGA CCGGTGTCGC CCGTCCGGTC CGCCGGCCGG TGGGTGCGGA CGACGGCGCC CTGCACCTGG TCGACGCCAC CTCGGGGGCC GGCGGGCTGC CGGTCGACGT GCGCGAGGTG GACGTCTACT ACTTCGCGCC GCAGAAGAGC TTTGCCTCCG ACGGCGGCCT GTGGGCGGCG CTCGTGTCCC CGGCGGCGAT CGACCGGCTC GCCGAGATCG CCGCGACGGA CCGGTGGATC CCGCCGTTCC TCGATCTCAC CACGGCCCGG GACAACAGCT CCAAGGACCA GACCTACAAC ACCCCGGCAG TCGCGACGCT GTTCCTGTTC GCCGACCAGA TCGAGTGGAT GCTCGCCCAG GGCGGGCTGG ACTGGTGCGT GCGGAGGACC GCGGAATCGT CGTCCATCCT CTACACCTGG GCCGAGAAGA CCTCCTACGC GACACCGTTC GTCGCCGACC CGGCCGCGCG TTCACAGGTC GTCGTGACGG TCGACTTCGA GGGGGTGGAC GCCGCCGCCG TGGCCAAGGT GCTGCGCGCC AACGGTGTCG TCGACGTCGA GCCCTACCGC AAGCTCGGCC GCAACCAGCT GCGGGTGGCC TGCTTCCCGG CGGTCGAGCC GGCCGACGTC GAGGCGCTCA CCACGAGCAT CGACTACGTG GTCGAGCACC TGTAG
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Protein sequence | MADAPAIVLP DRLRPRDGRF GCGPSKIRPE AVEALATSGA TYLGTSHRQK PVKSLVGRVR AGLSELFSLP EGYEVVLGIG GATAFWDAAA FNLVRTRSQH LVFGEFGGKF ADTTKGAPFL AAPSVISSPP GTHPDWAPEA GIDVYATPHN ETSTGVARPV RRPVGADDGA LHLVDATSGA GGLPVDVREV DVYYFAPQKS FASDGGLWAA LVSPAAIDRL AEIAATDRWI PPFLDLTTAR DNSSKDQTYN TPAVATLFLF ADQIEWMLAQ GGLDWCVRRT AESSSILYTW AEKTSYATPF VADPAARSQV VVTVDFEGVD AAAVAKVLRA NGVVDVEPYR KLGRNQLRVA CFPAVEPADV EALTTSIDYV VEHL
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