Gene Francci3_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0081 
Symbol 
ID3905125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp98966 
End bp100075 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content71% 
IMG OID637877411 
Productcitrate synthase 2 
Protein accessionYP_479204 
Protein GI86738804 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA AAACAAGCGA TTTCAAGCCC GGTCTGGAAG GTGTGATCGC CTTCGAGACG 
GAGATCGCCG AGCCGGACAG GGAAGGTAGC GCGCTGCGTT ACCGCGGCGT CGACATCGAA
GACCTTGTTG GCAAGGTCGA CTACGGCCAC GTCTGGGGGC TGCTGGTCGA CGGGGCGTTC
GAGCCCGGAC TGCCGCCGGC CGAGCCCTTT CCGGTCCCGG TGCACTCCGG TGACATCCGG
GTGGACGTGC AGAGCGCGCT CGCGATGCTC GCGCCCTACT GGGGCCTGGG CCAGCTGATC
GACATCACCC CGGAGCAGGC ACGGGACGAT CTTGCCCGGG CATCGGTCGT GGCGTTGTCG
TTCGTCGCCC AGTCCGCGCG GGGCCTTGGT CAGCCGGCGG TGCCGCAGAA GGAGGTTGAC
CGGGCCCGGA CGATAACCGA GCGGTTCATG ATCCGTTGGC GTGGTGAACC GGATCCCAGG
CACGTCCAGG CCGTGGACGC CTACTGGGTC TCGGCCGCCG AGCACGGCAT GAACGCCTCG
ACGTTCACCG CCCGGGTGGT CGCCTCGACC GGCGCGGACG CCTCGGCGGC GCTGTCGGCT
GCCGTCGGTG CGCTGTCCGG TCCGCTGCAC GGCGGTGCTC CGTCCCGGGT GCTCGCGATG
CTCGACGAGG TCGAGCGCAC CGGCGACCCC CTCGGCTACG TCCGCCGCGC CCTGGACCGC
AAGGAGCGCC TGATGGGCTT CGGGCACCGG GTGTACCGCG CCGAGGACCC GCGGGCCCGG
GTGCTGCGCC GGACCGCTCG TGACCTGGGC TCGACCCGCT ACGAGGTGGC GGAGGCGCTG
GAGGCCGCCG CGATCGAGGA GCTGACCAAT CGGTTCCCGG ATCGCCCGCT GCGGACCAAC
GTCGAGTTCT GGTCGGCGGT GGTGCTGGAC TTCGCCGAGG TGCCGGCCCA TATGTTCACG
TCCATGTTCA CCTGTGCCCG CACCGCCGGC TGGAGTGCCC ACATCCTGGA ACAACAACGC
ACCGGGCGGC TGATCCGCCC GTCCGCGCGG TACGTGGGCC CCGCTCCGCG CCCGCTCGGT
GACGTTCTGC CGGGGGTCAG CCGTGGCTGA
 
Protein sequence
MAEKTSDFKP GLEGVIAFET EIAEPDREGS ALRYRGVDIE DLVGKVDYGH VWGLLVDGAF 
EPGLPPAEPF PVPVHSGDIR VDVQSALAML APYWGLGQLI DITPEQARDD LARASVVALS
FVAQSARGLG QPAVPQKEVD RARTITERFM IRWRGEPDPR HVQAVDAYWV SAAEHGMNAS
TFTARVVAST GADASAALSA AVGALSGPLH GGAPSRVLAM LDEVERTGDP LGYVRRALDR
KERLMGFGHR VYRAEDPRAR VLRRTARDLG STRYEVAEAL EAAAIEELTN RFPDRPLRTN
VEFWSAVVLD FAEVPAHMFT SMFTCARTAG WSAHILEQQR TGRLIRPSAR YVGPAPRPLG
DVLPGVSRG