Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0053 |
Symbol | |
ID | 3903532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 68071 |
End bp | 69915 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637877383 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_479176 |
Protein GI | 86738776 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCACT ACCGGAGCAA TCTGCGAGAC ATCGAGTTCA ACCTGTTCGA GGTGTTCGGG GTCGATCGCA CGCTCGGCAC CGGTCCCTTC GGGGAGATGG ACGCCGAGAC CGCGCGCGAG GTGCTGGCCG AGCTCGATCA CCTCGCCTCC GGACCCGTTG CCGAGTCCTT CACCGACGCC GACCGTCATC CACCGACCCT GGATCCGGCG ACCGGGTCGG TGACCCTGCC GGAGTCGTTC AAGAAGTCCT ACCAGGCCGT TCTGGACGGT GAGTGGTGGC GGCTCTACCT TCCGCCGCAC CTGGGTGGGC TGGGTGCGTC TCCGACCGTC GCGTGGGCGG CCTCGGAGCT GCTGCTCGGA GCGAACCCGG CCATCTTCAT GTACATGGCC GGGCCGACGT TCGCGGCGAT CCTGCACCGG CTCGGCAACG AATGGCAGCG CCAGCTCGCC GAGTTCGCCA TCGAACGGCA CTGGGGCGCG ACGATGGTGC TCACCGAGCC GGACGCGGGT TCCGACGTCG GGGCCGGTCG TACCAGGGCG ATCGAGCAGC CCGACGGCAC CTGGCACATC GAGGGCGTGA AGCGGTTCAT CACCAACGGG GACTGGGATG TCCCGGAGAA CATCATCCAC CTCGTGCTCG CCCGGCCGGA GGGGCACGGC CCGGGGAGTA AGGGCCTGTC GATGTTCGTG GTGCCGAAGT TCATGCCCGA TCCGCGGACC GGCACGCCCG GCGCCCGTAA CGGCGTCTAC GTGACGAACA TCGAGAAGAA GATGGGCCTG AAGGTCTCCG CCACCTGCGA GCTGCGGTTC GGTGAGCGGG CGCCGGCGGT CGGTTGGCTG GTCGGTGACG TCCACGAGGG CATCGCCCAG ATGTTCCAGG TGATCGAGTA CGCCCGGATG ATGGTGGGCA GCAAGGCCAT CGCCACGCTG TCCACCGGAT ATCTCAACGC GCTCGAGTTC GCCCGCACCC GCGTCCAGGG TGCGGACCTG GCCCGCGCGT CGGACAAGAC GGCACCGCGT GTCACGATCA TTCATCACCC GGATGTCCGC CGGATGCTGA TGATGCAGAA GGTGTATGCG GAGGGCATGC GTTCACTGGT GCTCTACACC GCGACGTTCC AGGACCGGGT TGCGCTGGCC GGCGAGCGGG GGGAGGCCGA CGAGCTCGCC GAACGCATCA ACGACCTGCT GCTCCCGATC GTCAAGGGGG TCGGCTCCGA ACGGTCCTAC GAGCTGCTCG CCTCTTCACT GCAGATCCTC GGTGGTTCCG GGTACCTGCA GGACTATCCG ATCGAGCAGT ACATCCGCGA TGCCAAGATC GACACTCTCT ACGAGGGCAC CACGTCGATC CAGGGCCAGG ACCTGTTTTT CCGGAAAATC GTCCGGGACC AGGGGCAGGC GCTGGCCTCC GTGCTGGGCG AGATCCAGAC GTTCGTGAAG GGCGAGGCCG GCAACGGCGC GCTGCGGGCG GAGCGGGAGG CGCTGGGGGT GGCCCTTGAG GACGTCCAGA GCATGGTGAA TTCGCTGGTC GGGTTCCTCA CCGGCGCCGC CGAGGAGGCC GCCGCGATCT ACAAGGTCGG CCTGAATACG ACGAGGCTGC TGATGAGCCT CGGTGACCTG ATCATCGGAT GGCTGCTCCT GCGCGGCGCC GAGGTAGCCC TGCGGACCCA GGATTCTCCG GCGTCCGCCG GGGCCCGGCC CGCTCGGGAC GCCGCCTTTT ACCAGGGCAA GGTGGCCGCC GCGCGCTGGT TCGCGGCCAA TGTGCTACCG GAGTTGACGG CGCGCCGGGT AGCGCTGGAG TCCACCGGCC TCGGGCTCAT GGAACTGCCG GAGGAGGCGT TCTGA
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Protein sequence | MGHYRSNLRD IEFNLFEVFG VDRTLGTGPF GEMDAETARE VLAELDHLAS GPVAESFTDA DRHPPTLDPA TGSVTLPESF KKSYQAVLDG EWWRLYLPPH LGGLGASPTV AWAASELLLG ANPAIFMYMA GPTFAAILHR LGNEWQRQLA EFAIERHWGA TMVLTEPDAG SDVGAGRTRA IEQPDGTWHI EGVKRFITNG DWDVPENIIH LVLARPEGHG PGSKGLSMFV VPKFMPDPRT GTPGARNGVY VTNIEKKMGL KVSATCELRF GERAPAVGWL VGDVHEGIAQ MFQVIEYARM MVGSKAIATL STGYLNALEF ARTRVQGADL ARASDKTAPR VTIIHHPDVR RMLMMQKVYA EGMRSLVLYT ATFQDRVALA GERGEADELA ERINDLLLPI VKGVGSERSY ELLASSLQIL GGSGYLQDYP IEQYIRDAKI DTLYEGTTSI QGQDLFFRKI VRDQGQALAS VLGEIQTFVK GEAGNGALRA EREALGVALE DVQSMVNSLV GFLTGAAEEA AAIYKVGLNT TRLLMSLGDL IIGWLLLRGA EVALRTQDSP ASAGARPARD AAFYQGKVAA ARWFAANVLP ELTARRVALE STGLGLMELP EEAF
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