| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0049 |
|---|
| Symbol | |
|---|
| ID | 3903528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 62629 |
|---|
| End bp | 62964 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637877379 |
|---|
| Product | ABC-type multidrug transport system ATPase component-like |
|---|
| Protein accession | YP_479172 |
|---|
| Protein GI | 86738772 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.777277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCCGCT CGGACCTCCG CCGGGAGGCT CTCGTCACCG CCGTCGTTGA AATAGACCAT
CTGGCCAAGC GATACGGGTC CCAGCGCGCC GTCCGGGACG TGAGTTTCAC GGTGCGGGAA
GGGAACATCA CCGGTTTTCT GCGGCCGAAC GGCTCCGGCA AGACAACGAC GCTGCGCATC
CTGCTGAGTC TGGTCACCCC TGGTTCCGGC AGTGTGCTGG TCTTCGGTGG CTGCGGGGCG
GTCGAGGTGA ACGCGGCCGG CTGGAGAGTA GTCGGCTGGG GAGTGTTGGC CCAGGTGGCG
GCGCTCCTCG CGGTGCGGCG GGAGCTGCCG TCATGA
|
|---|
| Protein sequence | MPRSDLRREA LVTAVVEIDH LAKRYGSQRA VRDVSFTVRE GNITGFLRPN GSGKTTTLRI
LLSLVTPGSG SVLVFGGCGA VEVNAAGWRV VGWGVLAQVA ALLAVRRELP S
|
|---|
| |