Gene Francci3_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0046 
Symbol 
ID3903525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp57927 
End bp58268 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content72% 
IMG OID637877376 
Productanti-sigma-factor antagonist domain-containing protein 
Protein accessionYP_479169 
Protein GI86738769 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTGG ATGCTGGAGC CTTGCGGATG TCCGTGCGGC GGACAGGCGA GGACGTGCTC 
ATCGAACTCG CCGGGGAACT CGACACGGCC GGGCGGCTCC GGTTCCGTGA GCAGATCGGC
GAGCATCTTG GCCGGGGCGG GGGGACGGTC ACGGTGGATG TCGCGGGCCT GCGCTCGATC
GACGTCCCGG GGCTCGCAGC TCTGCTCCGC GCCGATCTGC TGCTCCGCCG GGTGCACTCA
TGTCTGGAGA TCCAGGCACC CACGCCGGCG TTCGCCGCGT TGTTGCGGGA GGCCGGTCTC
GACGGTCGGC TGCGGGTCGG TGGGGGATCC CGCCGCCGCT GA
 
Protein sequence
MRVDAGALRM SVRRTGEDVL IELAGELDTA GRLRFREQIG EHLGRGGGTV TVDVAGLRSI 
DVPGLAALLR ADLLLRRVHS CLEIQAPTPA FAALLREAGL DGRLRVGGGS RRR