Gene Francci3_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0037 
Symbol 
ID3903516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp45032 
End bp45817 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content57% 
IMG OID637877367 
Producthypothetical protein 
Protein accessionYP_479160 
Protein GI86738760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.350909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.929777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAAGCC TTGTGGAGTG GGCGGCCAGA CGCCTGATCA TCATCATCGT GACCACTGGC 
ACGGTGAGTG TGATCGGCGG ATTGGTCATC GGCCGTTACG TGGTCCCAGA CAATGGTTCG
AATGGCCCGG ATACCGCGTC CGTCGCGCCG CAGACCTCTC CGAGCGCTAC CCCGCCCGGA
GTGACGCCGA CGCTGGTCCC CTCGCCGAAA CCGTCCAGCC AACCGGCCAA CACCGCCGCC
ACCACCTCAG TCCCCGGTGT CCCCACCCGG ATCAACGAGT TCGGTATCCC GGTCGGCTAC
CCCCACACCG AAGCCGGCGC CGTCAGCGCC TGCGCCAACT ACGACAGAGC TTATGGAAAT
CCCGCGAATC GCACACCTTC CCGCGTCAAA GATGTCTTCA AATCGATGGC ACTTCCAGAA
GAAGCCGACA GACTTGCTAA CACCGTTATT TCAATCGACA AGGAAAACGC AAAATATTTT
AAATTGAACT CTCTTCAATC TCCGGCGGTA AACTGGATTG GACGGGTCAC GGGCTACACG
GTTCGCTCAT ATCGCAACGA TGAAGCTAAC ATAACACTCT GGGGACTAGT TGGAATCGGG
CTTTACGGAA ATCCCGATCC AAGGCTTGCC CCACATGAAG GCTGGGGAAC GGATAACTGT
CAGGTTGTAT GGAGTTCAGG GGACTGGAAG CTTAAAGATG CAAGCGATGG ACCTTGGACG
CCAGCCATCA CCGAACGAGC AGCCGAGAGT TTCCGTGATT TTCTATTGGT CGGAGCCGGA
CAGTGA
 
Protein sequence
MVSLVEWAAR RLIIIIVTTG TVSVIGGLVI GRYVVPDNGS NGPDTASVAP QTSPSATPPG 
VTPTLVPSPK PSSQPANTAA TTSVPGVPTR INEFGIPVGY PHTEAGAVSA CANYDRAYGN
PANRTPSRVK DVFKSMALPE EADRLANTVI SIDKENAKYF KLNSLQSPAV NWIGRVTGYT
VRSYRNDEAN ITLWGLVGIG LYGNPDPRLA PHEGWGTDNC QVVWSSGDWK LKDASDGPWT
PAITERAAES FRDFLLVGAG Q